RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SERTAD4Q9NUC0 356 aa8.97□□□□□ -0.97
ZNF558-201ENST00000301475 M0R2Z0 102 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 GRPP07492 148 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 CELA3BP08861 270 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 DUTP33316 252 aaKnown RBP8.96□□□□□ -0.97
ZNF558-201ENST00000301475 UBE2G1P62253 170 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 LTC4SQ16873 150 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 LRRC10Q5BKY1 277 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 PRR31Q5SQ13 230 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 TEPPQ6URK8 271 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 ZNF826PQ6ZT77 177 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 CXorf67Q86X51 503 aaPredicted RBP8.96□□□□□ -0.97
ZNF558-201ENST00000301475 GCNT2Q8N0V5 402 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 OR2Y1Q8NGV0 311 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 OR4A16Q8NH70 328 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 IGF2BP2-AS1Q96M15 143 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 VPS25Q9BRG1 176 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 DCTN5Q9BTE1 182 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 CLEC5AQ9NY25 188 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 IL19Q9UHD0 177 aa8.96□□□□□ -0.97
ZNF558-201ENST00000301475 PTPRZ1P23471 2315 aaPredicted RBP8.96□□□□□ -0.98
ZNF558-201ENST00000301475 SP1P08047 785 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 MAP1BP46821 2468 aaKnown RBP8.96□□□□□ -0.98
ZNF558-201ENST00000301475 RPL8P62917 257 aaKnown RBP8.96□□□□□ -0.98
ZNF558-201ENST00000301475 PRR20EP86478 221 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 PRR20CP86479 221 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 PRR20DP86480 221 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 PRR20BP86481 221 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 PRR20AP86496 221 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 OCIAD2Q56VL3 154 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 SLC35E4Q6ICL7 350 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 FAM216AQ8WUB2 273 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 FAM122AQ96E09 287 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 METRNQ9UJH8 293 aa8.96□□□□□ -0.98
ZNF558-201ENST00000301475 IZUMO1RA6ND01 250 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 OR2T8A6NH00 312 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 LINC00869P0C866 280 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 S100A7P31151 101 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 CA7P43166 264 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 BPIFB3P59826 476 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 TNFRSF19Q9NS68 423 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 TCF19Q9Y242 345 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 CCL4P13236 92 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 GPR6P46095 362 aaPredicted RBP8.95□□□□□ -0.98
ZNF558-201ENST00000301475 RNASEKQ6P5S7 137 aaKnown RBP8.95□□□□□ -0.98
ZNF558-201ENST00000301475 MDP1Q86V88 176 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 OR52E5Q8NH55 327 aa8.95□□□□□ -0.98
ZNF558-201ENST00000301475 DSPP15924 2871 aaKnown RBP8.95□□□□□ -0.98
ZNF558-201ENST00000301475 SH2D7A6NKC9 451 aaPredicted RBP8.94□□□□□ -0.98
ZNF558-201ENST00000301475 URB1-AS1Q96HZ7 61 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 ZNF331Q9NQX6 463 aaPredicted RBP8.94□□□□□ -0.98
ZNF558-201ENST00000301475 ARL2-SNX15V9GYD0 113 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 MOB3BQ86TA1 216 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 SLC24A4Q8NFF2 622 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 SSBP4Q9BWG4 385 aaPredicted RBP8.94□□□□□ -0.98
ZNF558-201ENST00000301475 GCM1Q9NP62 436 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 TMEM140Q9NV12 185 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 PCSK5Q92824 1860 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 GATA2P23769 480 aaPredicted RBP8.94□□□□□ -0.98
ZNF558-201ENST00000301475 PPOXP50336 477 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 MFAP2P55001 183 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 FAM120AOSQ5T036 256 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 PMS2CLQ68D20 193 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 LINC00479Q96M42 142 aa8.94□□□□□ -0.98
ZNF558-201ENST00000301475 SLC25A10Q9UBX3 287 aaPredicted RBP8.94□□□□□ -0.98
ZNF558-201ENST00000301475 ZFHX2Q9C0A1 2572 aaPredicted RBP8.93□□□□□ -0.98
ZNF558-201ENST00000301475 MUC21A0A0G2JKD1 596 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 MUC21A0A140T8X8 626 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 FAM90A9PA6NNJ1 464 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 OR7C2O60412 319 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 IGHV3-13P01766 116 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 IGHV3-7P01780 117 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 NPY1RP25929 384 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 GPR12P47775 334 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 C3AR1Q16581 482 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 RPL39P5Q59GN2 51 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 MUC21Q5SSG8 566 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 BVES-AS1Q5T3Y7 98 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 SPINK14Q6IE38 97 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 WIPF2Q8TF74 440 aaPredicted RBP8.93□□□□□ -0.98
ZNF558-201ENST00000301475 NABP2Q9BQ15 211 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 TMEM167BQ9NRX6 74 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 WASHC3Q9Y3C0 194 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 OR4C46A6NHA9 309 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 C19orf67A6NJJ6 358 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 M0R1X1 148 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 SMPD2O60906 423 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 NUDT3O95989 172 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 MYOD1P15172 320 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 KLF5Q13887 457 aaPredicted RBP8.93□□□□□ -0.98
ZNF558-201ENST00000301475 OR4A47Q6IF82 309 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 LINC00173Q6ZV60 143 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 C1orf210Q8IVY1 113 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 C12orf49Q9H741 205 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 SAP30LQ9HAJ7 183 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 ZNF355PQ9NSJ1 428 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 CLCF1Q9UBD9 225 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 LOXL2Q9Y4K0 774 aa8.93□□□□□ -0.98
ZNF558-201ENST00000301475 IGKV1OR2-108A0A075B7D4 117 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms