RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 HLA-DQA1P01909 254 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 STAG3L2P0CL84 134 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 STAG3L3P0CL85 134 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 MLANAQ16655 118 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 FOXB1Q99853 325 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 DCTN5Q9BTE1 182 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 SPCS1Q9Y6A9 102 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 FCGR3BO75015 233 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 PIAS2O75928 621 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 OR9G9P0C7N8 305 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 AAED1Q7RTV5 226 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 OR10AG1Q8NH19 301 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 GGTLC1Q9BX51 225 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 NPIPB13A6NJU9 1138 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 NPIPB4C9JG80 1138 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 SYS1-DBNDD2H3BUS1 97 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 CXCL13O43927 109 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 IGHV4-34P06331 123 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 RNPS1Q15287 305 aaKnown RBP11.93□□□□□ -0.5
CDT1-201ENST00000301019 FAM27BQ5VT28 67 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 BPIFA4PQ86YQ2 179 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 OR2K2Q8NGT1 345 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 C5orf30Q96GV9 206 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 OR2H1Q9GZK4 316 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 FZR1Q9UM11 496 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 PSG11Q9UQ72 335 aa11.93□□□□□ -0.5
CDT1-201ENST00000301019 POLEQ07864 2286 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 INTS1Q8N201 2190 aaKnown RBP11.92□□□□□ -0.5
CDT1-201ENST00000301019 IGFBP2P18065 325 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 AESQ08117 197 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 CADP27708 2225 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 LINC00473A8K010 186 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 HIGD1CA8MV81 97 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 C10orf142B7Z368 130 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 GRPP07492 148 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 CRYBA4P53673 196 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 ZNF718Q3SXZ3 478 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 PRAMEF5Q5TYX0 476 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 OR10W1Q8NGF6 305 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 TPPP3Q9BW30 176 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 DEFB126Q9BYW3 111 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
CDT1-201ENST00000301019 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 K7ERJ3 54 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 ATP5G2Q06055 141 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 OR8A1Q8NGG7 326 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 C19orf24Q9BVV8 132 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 WDR83OSQ9Y284 106 aa11.92□□□□□ -0.5
CDT1-201ENST00000301019 A0A0G2JLM5 398 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 A0A1W2PRE2 83 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 CD5LO43866 347 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 MT-ND6P03923 174 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 RHOBP62745 196 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 SCGB2A2Q13296 93 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 TRIP6Q15654 476 aaKnown RBP11.91□□□□□ -0.5
CDT1-201ENST00000301019 TBR1Q16650 682 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 NUP35Q8NFH5 326 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 TTTY13Q9BZ97 58 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 PRRG4Q9BZD6 226 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 KALRNO60229 2985 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 IGHV1-24A0A0C4DH33 117 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 CCR5P51681 352 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 FOXL2NBQ6ZUU3 175 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 URB1-AS1Q96HZ7 61 aa11.91□□□□□ -0.5
CDT1-201ENST00000301019 HLA-DRB1P01911 266 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 CCL3P10147 92 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 BRWD1-AS2P59051 145 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 CKS1BP61024 79 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 GNG5P63218 68 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 KIR3DS1Q14943 382 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 TMEM42Q69YG0 159 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 SH2D6Q7Z4S9 175 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 UBALD2Q8IYN6 164 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 TRIB1Q96RU8 372 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 TMEM38BQ9NVV0 291 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 IGHV1OR15-9A0A0B4J2B8 117 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 GGTLC3B5MD39 225 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 P04436 131 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 EDDM3AQ14507 147 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 NEU4Q8WWR8 484 aaPredicted RBP11.9□□□□□ -0.5
CDT1-201ENST00000301019 PGLYRP4Q96LB8 373 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 COMMD5Q9GZQ3 224 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 HES4Q9HCC6 221 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 CACNA1EQ15878 2313 aa11.9□□□□□ -0.5
CDT1-201ENST00000301019 CDIPTO14735 213 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 NCR2O95944 276 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 NMUP48645 174 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 YPEL5P62699 121 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 MUC3AQ02505 3323 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 TMEM97Q5BJF2 176 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 LYSMD4Q5XG99 296 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 ANKRD37Q7Z713 158 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 LEAP2Q969E1 77 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 SPSB4Q96A44 273 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 C10orf35Q96D05 121 aa11.9□□□□□ -0.51
CDT1-201ENST00000301019 DSCAML1Q8TD84 2053 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms