RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 IGHV4-39P01824 125 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 FBLN7Q53RD9 439 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TBX6O95947 436 aaPredicted RBP11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 C3orf36Q3SXR2 165 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 C21orf62Q9NYP8 219 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 HOXB1P14653 301 aaPredicted RBP11.4□□□□□ -0.59
CHRFAM7A-201ENST00000299847 DPM3Q9P2X0 92 aa11.4□□□□□ -0.59
CHRFAM7A-201ENST00000299847 UNC13CQ8NB66 2214 aa11.4□□□□□ -0.59
CHRFAM7A-201ENST00000299847 KBTBD11-OT1A0A1B0GTJ5 212 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 TMEM183AQ8IXX5 376 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 COL5A3P25940 1745 aaPredicted RBP11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 OR11H12B2RN74 326 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 GLRXP35754 106 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 ZNF324BQ6AW86 544 aaPredicted RBP11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 LINC00518Q8N0U6 118 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 OR11H1Q8NG94 326 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 OR11H2Q8NH07 326 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 ALKBH7Q9BT30 221 aaPredicted RBP11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 RPP21Q9H633 154 aaKnown RBP11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 MYOFQ9NZM1 2061 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 LY6DQ14210 128 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 FAM181AQ8N9Y4 354 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 LYZL4Q96KX0 146 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C2orf88Q9BSF0 95 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 DEPPQ9NTK1 212 aa11.39□□□□□ -0.59
CHRFAM7A-201ENST00000299847 CD33P20138 364 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 SAPCD1Q5SSQ6 148 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 WDYHV1Q96HA8 205 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 IGKV1D-13A0A0B4J2D9 117 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 CD7P09564 240 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 IGKV1-13P0DP09 117 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 PYYP10082 97 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 LOC390937A0A1W2PQ73 354 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 UMODP07911 640 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 ADMP35318 185 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 ANKRD36A6QL64 1941 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 PGPEP1LA6NFU8 196 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C10orf126Q8N4M7 172 aa11.38□□□□□ -0.59
CHRFAM7A-201ENST00000299847 PINLYPA6NC86 204 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 ATRAIDQ6UW56 229 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 FER1L6-AS1Q8NA97 138 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 FMC1Q96HJ9 113 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C19orf24Q9BVV8 132 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 RBBP6Q7Z6E9 1792 aaKnown RBP11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 TRAV14DV4A0A0A6YYC5 116 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 A0A0U1RRA0 63 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 NPC2P61916 151 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 TM2D1Q9BX74 207 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 HIGD1CA8MV81 97 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 FAM57AQ8TBR7 257 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 SRP19P09132 144 aaKnown RBP11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 NUTF2P61970 127 aaKnown RBP11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 MRPS16Q9Y3D3 137 aaKnown RBP11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 CD8AP01732 235 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 SDF2L1Q9HCN8 221 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C1QTNF9P0C862 333 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 TRBV7-9A0A0J9YWB2 115 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 VDAC2P45880 294 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 ZNF362Q5T0B9 420 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 BEND2Q8NDZ0 799 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C1QTNF5Q9BXJ0 243 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 GP6Q9HCN6 339 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 OR10J3Q5JRS4 329 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 FAM169BQ8N8A8 192 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 COPS9Q8WXC6 57 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 JMJD8Q96S16 334 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 DNAJC13O75165 2243 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 THSD7AQ9UPZ6 1657 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 MALP21145 153 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 STHQ8IWL8 128 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 A0A1B0GWB2 263 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 HOXA5P20719 270 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 GPX4P36969 197 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C1QL4Q86Z23 238 aa11.36□□□□□ -0.59
CHRFAM7A-201ENST00000299847 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 OR4X2Q8NGF9 303 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 DMRT1Q9Y5R6 373 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 A0A1B0GUT8 65 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 LINC00614P0C842 121 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 LDLRAD2Q5SZI1 272 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 FGFBP3Q8TAT2 258 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 CFHR5Q9BXR6 569 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 TMEM50AO95807 157 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 RAB9AP51151 201 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 SPRR3Q9UBC9 169 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 CA1P00915 261 aaPredicted RBP11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 ZNF525Q8N782 197 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 NPFFR1Q9GZQ6 430 aa11.35□□□□□ -0.59
CHRFAM7A-201ENST00000299847 PARP14Q460N5 1801 aa11.34□□□□□ -0.59
CHRFAM7A-201ENST00000299847 OR10W1Q8NGF6 305 aa11.34□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C18orf12Q96KH6 178 aa11.34□□□□□ -0.59
CHRFAM7A-201ENST00000299847 PQLC2LA1A4F0 135 aa11.34□□□□□ -0.59
CHRFAM7A-201ENST00000299847 C17orf100A8MU93 164 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms