RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 TP53TG5Q9Y2B4 290 aa5.37□□□□□ -1.55
DEFB1-201ENST00000297439 PPIAL4AQ9Y536 164 aa5.37□□□□□ -1.55
DEFB1-201ENST00000297439 TANC2Q9HCD6 1990 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 SPEGQ15772 3267 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 TRBV9A0A0B4J1U6 114 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 MDFIC2A0A1B0GVS7 189 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 PSMB11A5LHX3 300 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 ADARB2-AS1A8MUL3 147 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 K7EM74 188 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 SMAD7O15105 426 aaKnown RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 NDUFB3O43676 98 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 GATCO43716 136 aaKnown RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 MMP23AO75900 390 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 NDUFB4O95168 129 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 IGKV1-16P04430 117 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 SAA1P0DJI8 122 aaPredicted RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 IL3RAP26951 378 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 LGALS7P47929 136 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 RPL8P62917 257 aaKnown RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 ERHP84090 104 aaKnown RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 RBPJQ06330 500 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 BSPH1Q075Z2 132 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 JOSD1Q15040 202 aaPredicted RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 LRRC10Q5BKY1 277 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 GCSAMLQ5JQS6 135 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 FAM201AQ5SY85 155 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 UTF1Q5T230 341 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 CST9LP1Q5W188 147 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 TMEM200BQ69YZ2 307 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 DUX4L9Q6RFH8 374 aaPredicted RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 THAP8Q8NA92 274 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 OR9G1Q8NH87 305 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 PACRGQ96M98 296 aaPredicted RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 HARBI1Q96MB7 349 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 NABP2Q9BQ15 211 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 VKORC1Q9BQB6 163 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 GPR61Q9BZJ8 451 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 PATZ1Q9HBE1 687 aaKnown RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 SEPSECSQ9HD40 501 aaKnown RBP5.36□□□□□ -1.55
DEFB1-201ENST00000297439 WASHC3Q9Y3C0 194 aa5.36□□□□□ -1.55
DEFB1-201ENST00000297439 MYO15AQ9UKN7 3530 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 DSCAMO60469 2012 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 A0A1W2PPQ1 181 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 SRRM4A7MD48 611 aaKnown RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 LINC00587B1AMM8 73 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 SHISA9B4DS77 424 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 B9A039 149 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 K7ENP7 123 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 FCN3O75636 299 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 GCGP01275 180 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 CRYGCP07315 174 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 C8orf88P0DMB2 117 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 ESDP10768 282 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 NDUFB7P17568 137 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 IGFBP2P18065 325 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 LOXP28300 417 aaPredicted RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 GRNP28799 593 aaKnown RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 COMPP49747 757 aaPredicted RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 SUB1P53999 127 aaKnown RBP eCLIP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 TAS2R60P59551 318 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 CCL8P80075 99 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 RPL19P84098 196 aaKnown RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 GAMTQ14353 236 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 GFRALQ6UXV0 394 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 TEX45Q8NA69 505 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 OR4P4Q8NGL7 312 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 OR10G8Q8NGN5 311 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 OR10D4PQ8NGN7 298 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 OR1L4Q8NGR5 311 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 C8orf46Q8TAG6 207 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 LEAP2Q969E1 77 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 FLYWCH2Q96CP2 140 aaKnown RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 SMIM12Q96EX1 92 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 PFDN5Q99471 154 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 RNF5Q99942 180 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 SRSF8Q9BRL6 282 aaKnown RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 ELOVL1Q9BW60 279 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 MRPL20Q9BYC9 149 aaKnown RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 COMMD5Q9GZQ3 224 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 PRDM13Q9H4Q3 707 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 OSTCQ9NRP0 149 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 IL36BQ9NZH7 164 aa5.35□□□□□ -1.55
DEFB1-201ENST00000297439 YTHDF2Q9Y5A9 579 aaKnown RBP5.35□□□□□ -1.55
DEFB1-201ENST00000297439 IGKV1OR2-108A0A075B7D4 117 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 FAM229AH3BQW9 127 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 CORTO00230 105 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 ISLRO14498 428 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 IGLV2-23P01705 113 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 AMBPP02760 352 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 MT-ND6P03923 174 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 DEFA4P12838 97 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 APOBEC3AP31941 199 aaPredicted RBP5.34□□□□□ -1.55
DEFB1-201ENST00000297439 GNG10P50151 68 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 CNN1P51911 297 aaKnown RBP5.34□□□□□ -1.55
DEFB1-201ENST00000297439 RPS16P62249 146 aaKnown RBP5.34□□□□□ -1.55
DEFB1-201ENST00000297439 VMA21Q3ZAQ7 101 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 FAM78BQ5VT40 261 aa5.34□□□□□ -1.55
DEFB1-201ENST00000297439 ETFRF1Q6IPR1 90 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms