RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 ARR3P36575 388 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 OPRK1P41145 380 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 GNG3P63215 75 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 MRPS21P82921 87 aaKnown RBP8.45□□□□□ -1.06
CLDN1-201ENST00000295522 MEF2CQ06413 473 aaPredicted RBP8.45□□□□□ -1.06
CLDN1-201ENST00000295522 COX19Q49B96 90 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 TEPPQ6URK8 271 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 TCF24Q7RTU0 167 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 ZNF645Q8N7E2 425 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 OR2K2Q8NGT1 345 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 OR10AG1Q8NH19 301 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 SAA2-SAA4A0A096LPE2 208 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 IZUMO1RA6ND01 250 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 HBZP02008 142 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 ZNF718Q3SXZ3 478 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 WIPI1Q5MNZ9 446 aaPredicted RBP8.45□□□□□ -1.06
CLDN1-201ENST00000295522 MMP17Q9ULZ9 603 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 TNCP24821 2201 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 IGHV1OR21-1A0A087WYE8 117 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 NFAM1Q8NET5 270 aaPredicted RBP8.45□□□□□ -1.06
CLDN1-201ENST00000295522 OR8A1Q8NGG7 326 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 NPVFQ9HCQ7 196 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 PILRBQ9UKJ0 227 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 CACNA1EQ15878 2313 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 A0A1W2PRE2 83 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 C2orf70A6NJV1 201 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 C9JCJ5 164 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 CHEK1O14757 476 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 PLAUP00749 431 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 UBE2L3P68036 154 aaKnown RBP8.44□□□□□ -1.06
CLDN1-201ENST00000295522 SLC25A53Q5H9E4 307 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 LYSMD4Q5XG99 296 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 RAB1CQ92928 201 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 OSTCQ9NRP0 149 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 MUC22E2RYF6 1773 aaPredicted RBP8.44□□□□□ -1.06
CLDN1-201ENST00000295522 PPIAL4CA0A0B4J2A2 164 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 A0A1B0GV72 72 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 LINC00473A8K010 186 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 PPIAL4GP0DN37 164 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 FOXG1P55316 489 aaPredicted RBP8.44□□□□□ -1.06
CLDN1-201ENST00000295522 HIST1H1AQ02539 215 aaPredicted RBP8.44□□□□□ -1.06
CLDN1-201ENST00000295522 TMEM97Q5BJF2 176 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 ZNF788Q6ZQV5 615 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 MOB3BQ86TA1 216 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 OR10D3Q8NH80 312 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 PGLYRP4Q96LB8 373 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 MRPL27Q9P0M9 148 aaKnown RBP8.44□□□□□ -1.06
CLDN1-201ENST00000295522 ARFGEF3Q5TH69 2177 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 TRAV3A0A0B4J244 114 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 AHRRA9YTQ3 701 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 GPR12P47775 334 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 TBR1Q16650 682 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 TAAR6Q96RI8 345 aa8.44□□□□□ -1.06
CLDN1-201ENST00000295522 A0A0G2JLM5 398 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 C12orf77C9JDV5 145 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 NDUFS8O00217 210 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 IGHV3-48P01763 117 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 P04436 131 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 NMUP48645 174 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 CFHR1Q03591 330 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 RBPJQ06330 500 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 LINC00696Q6ZRV3 163 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 TEX45Q8NA69 505 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 OR2V2Q96R30 315 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 CHCHD2Q9Y6H1 151 aaPredicted RBP8.43□□□□□ -1.06
CLDN1-201ENST00000295522 A6NDN8 102 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 G3V4G9 280 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 MPDU1O75352 247 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 HLA-DRB1P01911 266 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 OR5AL1P0C617 328 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 SLC25A40Q8TBP6 338 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 BLNKQ8WV28 456 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 SNRNP40Q96DI7 357 aaKnown RBP8.43□□□□□ -1.06
CLDN1-201ENST00000295522 NABP2Q9BQ15 211 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 DCTN5Q9BTE1 182 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 COMMD5Q9GZQ3 224 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 JKAMPQ9P055 326 aa8.43□□□□□ -1.06
CLDN1-201ENST00000295522 PRR14LQ5THK1 2151 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 MYOD1P15172 320 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 DSCR4P56555 118 aaPredicted RBP8.42□□□□□ -1.06
CLDN1-201ENST00000295522 FOXE3Q13461 319 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 RTL8BQ17RB0 113 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 DHRS13Q6UX07 377 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 MOB1BQ7L9L4 216 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 MTURNQ8N3F0 131 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 OR51B2Q9Y5P1 312 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 FREM2Q5SZK8 3169 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.42□□□□□ -1.06
CLDN1-201ENST00000295522 IGHV1-24A0A0C4DH33 117 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 GGTLC3B5MD39 225 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 LIFP15018 202 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 RAC3P60763 192 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 SCGB2A2Q13296 93 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 ZNF826PQ6ZT77 177 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 TMEM167BQ9NRX6 74 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 TRAV5A0A0B4J249 113 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 H3BTX0 84 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 WNT9BO14905 357 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms