RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CRYABP02511 175 aaKnown RBP13.14□□□□□ -0.31
SMAD6-201ENST00000288840 NUBP1P53384 320 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 PAX5Q02548 391 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 NPIPB3Q92617 1050 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 MGST2Q99735 147 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 GGTLC1Q9BX51 225 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 SPRY4Q9C004 299 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 LOC400499M0QZD8 3231 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 LYNX1G3V0Z9 82 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 LYNX1P0DP58 116 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 C1orf185Q5T7R7 199 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 ZNF474Q6S9Z5 364 aaPredicted RBP13.13□□□□□ -0.31
SMAD6-201ENST00000288840 OR5B3Q8NH48 314 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 PRNDQ9UKY0 176 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 SLC25A5P05141 298 aaKnown RBP13.13□□□□□ -0.31
SMAD6-201ENST00000288840 HIST1H1BP16401 226 aaKnown RBP13.13□□□□□ -0.31
SMAD6-201ENST00000288840 OR5AU1Q8NGC0 362 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 TXN2Q99757 166 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 ANKRD11Q6UB99 2663 aaPredicted RBP13.13□□□□□ -0.31
SMAD6-201ENST00000288840 KBTBD11-OT1A0A1B0GTJ5 212 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 MOSP00540 346 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 RBP4P02753 201 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 GNB2P62879 340 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 CENPWQ5EE01 88 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 TGIF2LXQ8IUE1 241 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 GAL3ST2Q9H3Q3 398 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 IDI2-AS1Q9NZ38 188 aa13.13□□□□□ -0.31
SMAD6-201ENST00000288840 MMP23AO75900 390 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 EFNB3Q15768 340 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 LINC01551Q86U37 167 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 MRPL20Q9BYC9 149 aaKnown RBP13.12□□□□□ -0.31
SMAD6-201ENST00000288840 MRPL18Q9H0U6 180 aaKnown RBP13.12□□□□□ -0.31
SMAD6-201ENST00000288840 TANC2Q9HCD6 1990 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 TRAV5A0A0B4J249 113 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 ZNF729A6NN14 1252 aaPredicted RBP13.12□□□□□ -0.31
SMAD6-201ENST00000288840 SUB1P53999 127 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMAD6-201ENST00000288840 TRBV24-1A0A075B6N3 115 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 TPPP2P59282 170 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 TIMM23BQ5SRD1 257 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 BORCS7Q96B45 105 aa13.12□□□□□ -0.31
SMAD6-201ENST00000288840 NPIPB11E5RHQ5 1161 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 CD40P25942 277 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 TIMP3P35625 211 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 KIR2DS2P43631 304 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 S4R3C0 116 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 PPIAL4EA0A075B759 164 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 PPIAL4DF5H284 164 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 TCAPO15273 167 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 GFRA3O60609 400 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 MPDU1O75352 247 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 PPIAL4FP0DN26 164 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 RND2P52198 227 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 ATOH7Q8N100 152 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 ADTRPQ96IZ2 230 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
SMAD6-201ENST00000288840 PPIAL4AQ9Y536 164 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 SLC25A15Q9Y619 301 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 RPL8P62917 257 aaKnown RBP13.11□□□□□ -0.31
SMAD6-201ENST00000288840 RNF151Q2KHN1 245 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 MMD2Q8IY49 270 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 TCTEX1D1Q8N7M0 179 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 ZNF714Q96N38 554 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 IL19Q9UHD0 177 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 PTPRQQ9UMZ3 2332 aa13.11□□□□□ -0.31
SMAD6-201ENST00000288840 NAV3Q8IVL0 2385 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 KIR3DL3Q8N743 410 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 OR1L8Q8NGR8 309 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 PLSCR4Q9NRQ2 329 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 YPEL1O60688 119 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 SAA1P0DJI8 122 aaPredicted RBP13.1□□□□□ -0.31
SMAD6-201ENST00000288840 ZNF137PP52743 207 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 MFAP2P55001 183 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 LYZP61626 148 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 YPEL2Q96QA6 119 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 ONECUT1Q9UBC0 465 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 YTHDF2Q9Y5A9 579 aaKnown RBP13.1□□□□□ -0.31
SMAD6-201ENST00000288840 IFITM10A6NMD0 228 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 HSBP1O75506 76 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 IGHV1-46P01743 117 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 PYYP10082 97 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 S100A7P31151 101 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 SRP14P37108 136 aaKnown RBP13.1□□□□□ -0.31
SMAD6-201ENST00000288840 RELBQ01201 579 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 MSMPQ1L6U9 139 aa13.1□□□□□ -0.31
SMAD6-201ENST00000288840 PFN1P07737 140 aaKnown RBP13.09□□□□□ -0.31
SMAD6-201ENST00000288840 RNASEKQ6P5S7 137 aaKnown RBP13.09□□□□□ -0.31
SMAD6-201ENST00000288840 OR2D3Q8NGH3 330 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 VAMP8Q9BV40 100 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 IFI27L2Q9H2X8 130 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 NGBQ9NPG2 151 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 K7EM74 188 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 VMA21Q3ZAQ7 101 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 LINC00479Q96M42 142 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 TNFSF13O75888 250 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 ADMP35318 185 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 BSPH1Q075Z2 132 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 HLA-DRB5Q30154 266 aa13.09□□□□□ -0.31
SMAD6-201ENST00000288840 LEMD1Q68G75 181 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms