RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 M0QZ24 198 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 MPDU1O75352 247 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 PRB4P10163 310 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-202ENST00000273342 ESDP10768 282 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 TDGF1P13385 188 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 USF1P22415 310 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-202ENST00000273342 MEOX1P50221 254 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 SSPNQ14714 243 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 LRRC29Q8WV35 223 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 GNB1LQ9BYB4 327 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 ZNF355PQ9NSJ1 428 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 SELENOKQ9Y6D0 94 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 DMXL1Q9Y485 3027 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 SH2D7A6NKC9 451 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-202ENST00000273342 NTN3O00634 580 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-202ENST00000273342 CEACAM8P31997 349 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-202ENST00000273342 CX3CL1P78423 397 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 TNXAQ16473 311 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 RNASEKQ6P5S7 137 aaKnown RBP10.63□□□□□ -0.71
COL8A1-202ENST00000273342 SLC24A4Q8NFF2 622 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 NABP2Q9BQ15 211 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 ZNRD1Q9P1U0 126 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 TRGV10A0A0A0MS01 117 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 GGTLC3B5MD39 225 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 PRSS46E5RG02 174 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 H0Y8G0 127 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 WISP2O76076 250 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 MT-CO2P00403 227 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 APCSP02743 223 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 RPL8P62917 257 aaKnown RBP10.63□□□□□ -0.71
COL8A1-202ENST00000273342 MCRIP2Q9BUT9 160 aaKnown RBP10.63□□□□□ -0.71
COL8A1-202ENST00000273342 ENY2Q9NPA8 101 aa10.63□□□□□ -0.71
COL8A1-202ENST00000273342 PKDREJQ9NTG1 2253 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 LOC102724200A0A096LPH7 203 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-202ENST00000273342 HSBP1O75506 76 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 MFAP2P55001 183 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 KIR3DL3Q8N743 410 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 CLEC5AQ9NY25 188 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 TNRC6BQ9UPQ9 1833 aaKnown RBP10.62□□□□□ -0.71
COL8A1-202ENST00000273342 TSPOP30536 169 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 RAB31Q13636 194 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 MORN2Q502X0 79 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 MORN5Q5VZ52 161 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 STUMQ69YW2 141 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 ARRDC1-AS1Q9H2J1 176 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 ZNF331Q9NQX6 463 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-202ENST00000273342 RPH3ALQ9UNE2 315 aa10.62□□□□□ -0.71
COL8A1-202ENST00000273342 LSM4Q9Y4Z0 139 aaKnown RBP10.62□□□□□ -0.71
COL8A1-202ENST00000273342 PCNX2A6NKB5 2137 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 PLAUP00749 431 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 IGHV1-2P23083 117 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 PRDX2P32119 198 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 PRRX1P54821 245 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 ZNF439Q8NDP4 499 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 OR9G1Q8NH87 305 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 IL19Q9UHD0 177 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 IGKV1OR2-108A0A075B7D4 117 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 RNFT1Q5M7Z0 435 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 FAM214BQ7L5A3 538 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 OR2Z1Q8NG97 314 aa10.61□□□□□ -0.71
COL8A1-202ENST00000273342 YLPM1P49750 1951 aaKnown RBP10.61□□□□□ -0.71
COL8A1-202ENST00000273342 C15orf65H3BRN8 121 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 M0R2Z0 102 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 CD46P15529 392 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 LEMD1Q68G75 181 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 OR4A47Q6IF82 309 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 LYG1Q8N1E2 194 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 ZNF503Q96F45 646 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 TXNDC17Q9BRA2 123 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 TECRQ9NZ01 308 aaKnown RBP10.6□□□□□ -0.71
COL8A1-202ENST00000273342 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 ADGRG4Q8IZF6 3080 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 C9JCJ5 164 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 FOXA3P55318 350 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-202ENST00000273342 SPRNQ5BIV9 151 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-202ENST00000273342 IQCF6A8MYZ5 107 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 AMY1AP04745 511 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 SP1P08047 785 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 LINC00869P0C866 280 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 TMEM249Q2WGJ8 235 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 EBLN2Q6P2I7 272 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 WDR73Q6P4I2 378 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 TCTEX1D1Q8N7M0 179 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 DEFB108BQ8NET1 73 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 OR52E5Q8NH55 327 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 C18orf32Q8TCD1 76 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 HES4Q9HCC6 221 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 SPRR3Q9UBC9 169 aa10.6□□□□□ -0.71
COL8A1-202ENST00000273342 CRYABP02511 175 aaKnown RBP10.59□□□□□ -0.71
COL8A1-202ENST00000273342 PYYP10082 97 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 IGLL1P15814 213 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 VAMP3Q15836 100 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 SMIM21Q3B7S5 101 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 DUX4L9Q6RFH8 374 aaPredicted RBP10.59□□□□□ -0.71
COL8A1-202ENST00000273342 VHLLQ6RSH7 139 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 DHRS13Q6UX07 377 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 OR10W1Q8NGF6 305 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms