RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 IGFBPL1Q8WX77 278 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 TMEM106BQ9NUM4 274 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 IL19Q9UHD0 177 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 A0A0G2JNJ9 132 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 YPEL1O60688 119 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 CD33P20138 364 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 LYPD2Q6UXB3 125 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 BTF3L4Q96K17 158 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 YPEL2Q96QA6 119 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 GNB4Q9HAV0 340 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 Q9UFV3 132 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 NAV3Q8IVL0 2385 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 C10orf91Q5T1B1 145 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 LEMD1Q68G75 181 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 C5orf30Q96GV9 206 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 TIMD4Q96H15 378 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 SRD5A3Q9H8P0 318 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 DPRXA6NFQ7 191 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 IGLV2-14P01704 120 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 SOD3P08294 240 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 BPIFB3P59826 476 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 OR1L6Q8NGR2 347 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 MBD3L1Q8WWY6 194 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 IFI27L2Q9H2X8 130 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 WDR83OSQ9Y284 106 aa10.34□□□□□ -0.75
UBXN4-201ENST00000272638 TLN2Q9Y4G6 2542 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 CT45A6P0DMU7 189 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 CT45A5P0DMU8 189 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 CT45A7P0DMV0 189 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 CRISP2P16562 243 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 TCTEX1D1Q8N7M0 179 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 ZNF439Q8NDP4 499 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 FKBP11Q9NYL4 201 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 PITPNC1Q9UKF7 332 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 SETD2Q9BYW2 2564 aaPredicted RBP10.33□□□□□ -0.76
UBXN4-201ENST00000272638 A0A087X0M5 115 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 A0A1B0GX30 115 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 ZNF729A6NN14 1252 aaPredicted RBP10.33□□□□□ -0.76
UBXN4-201ENST00000272638 RPL29P47914 159 aaKnown RBP10.33□□□□□ -0.76
UBXN4-201ENST00000272638 MBNL2Q5VZF2 373 aaKnown RBP10.33□□□□□ -0.76
UBXN4-201ENST00000272638 C22orf34Q6ZV56 151 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 COA4Q9NYJ1 87 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 A0A1B0GUS0 222 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 CA1P00915 261 aaPredicted RBP10.33□□□□□ -0.76
UBXN4-201ENST00000272638 NUBP1P53384 320 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 C21orf62-AS1Q17RA5 79 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 C10orf113Q5VZT2 155 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 ODF3L1Q8IXM7 274 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 ANAPC16Q96DE5 110 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 MGST2Q99735 147 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 TUBA4BQ9H853 241 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 KIAA1549Q9HCM3 1950 aa10.33□□□□□ -0.76
UBXN4-201ENST00000272638 MAP1AP78559 2803 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 MBD3L4A6NDZ8 208 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 MBD3L3A6NE82 208 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 MBD3L5A6NJ08 208 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 TMEM250H0YL14 139 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 ZNF137PP52743 207 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 C19orf35Q6ZS72 473 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 MBD3L2Q8NHZ7 208 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 TANC2Q9HCD6 1990 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 IGHV1-69-2A0A0G2JMI3 117 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 PYYP10082 97 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 SEM1Q6ZVN7 128 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 EAF1Q96JC9 268 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 FBXL15Q9H469 300 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 USP9YO00507 2555 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 GFRA3O60609 400 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 RELBQ01201 579 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 DIAPH2-AS1Q14236 149 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 Q6ZS92 163 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 GSX1Q9H4S2 264 aaPredicted RBP10.32□□□□□ -0.76
UBXN4-201ENST00000272638 CCDC168Q8NDH2 2452 aa10.32□□□□□ -0.76
UBXN4-201ENST00000272638 C15orf61A6NNL5 157 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 ZNF253O75346 499 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 HOXA5P20719 270 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 AMTP48728 403 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 CENPWQ5EE01 88 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 MUC15Q8N387 334 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 PNKDQ8N490 385 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 SIGLECL1Q8N7X8 197 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 OR1P1Q8NH06 330 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 SFRP2Q96HF1 295 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 EXPH5Q8NEV8 1989 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 TMSB15BA0A087X1C1 80 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 MPDU1O75352 247 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 RPL27AP46776 148 aaKnown RBP10.31□□□□□ -0.76
UBXN4-201ENST00000272638 GNB2P62879 340 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 EFNB3Q15768 340 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 RPEL1Q2QD12 228 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 VSTM2AQ8TAG5 236 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 FAM222BQ8WU58 562 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 PAXXQ9BUH6 204 aa10.31□□□□□ -0.76
UBXN4-201ENST00000272638 ARHGAP32A7KAX9 2087 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms