RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 NDUFA4O00483 81 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 MRPS14O60783 128 aaKnown RBP6.57□□□□□ -1.36
TPM3-201ENST00000271850 DHFRP00374 187 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 CTSDP07339 412 aaPredicted RBP6.57□□□□□ -1.36
TPM3-201ENST00000271850 OR13C7P0DN81 318 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 ATF4P18848 351 aaPredicted RBP6.57□□□□□ -1.36
TPM3-201ENST00000271850 ARPC4P59998 168 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 MLANAQ16655 118 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 ANKRD55Q3KP44 614 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 RBPMS2Q6ZRY4 209 aaKnown RBP6.57□□□□□ -1.36
TPM3-201ENST00000271850 OR5AP2Q8NGF4 316 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 FCAMRQ8WWV6 532 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 RNF2Q99496 336 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 MAP6D1Q9H9H5 199 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 PLEKHA2Q9HB19 425 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 DAZ1Q9NQZ3 744 aaKnown RBP6.57□□□□□ -1.36
TPM3-201ENST00000271850 BLOC1S6Q9UL45 172 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 RAB26Q9ULW5 256 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 DYNC1H1Q14204 4646 aaKnown RBP6.57□□□□□ -1.36
TPM3-201ENST00000271850 DNAH11Q96DT5 4516 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 IGHV3-49A0A0A0MS15 119 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 KIR2DL5BA0A0G2JN68 375 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 KIR2DL5BA0A0G2JPC4 375 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 CHEK1O14757 476 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 PGLYRP1O75594 196 aaPredicted RBP6.56□□□□□ -1.36
TPM3-201ENST00000271850 SCGNO76038 276 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 IGKV1-39P01597 117 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 IGKV1D-39P04432 117 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 RLN1P04808 185 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 CTSGP08311 255 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 TRAPPC2P0DI81 140 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 TRAPPC2BP0DI82 140 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 G6PCP35575 357 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 RFX2P48378 723 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 IDNKQ5T6J7 187 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 AADACL3Q5VUY0 350 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 FAM90A2PQ658T7 463 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 SLC25A24Q6NUK1 477 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 KIR2DL5AQ8N109 375 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 LILRB2Q8N423 598 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 OR5B3Q8NH48 314 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 KIR2DL5BQ8NHK3 375 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 MOB3AQ96BX8 217 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 BSCL2Q96G97 398 aaPredicted RBP6.56□□□□□ -1.36
TPM3-201ENST00000271850 COMMD5Q9GZQ3 224 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 C21orf62Q9NYP8 219 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 COMMD9Q9P000 198 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 ETV7Q9Y603 341 aa6.56□□□□□ -1.36
TPM3-201ENST00000271850 I3L2K1 104 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 K7EMT4 169 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 IGHV3-48P01763 117 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 APOHP02749 345 aaPredicted RBP6.55□□□□□ -1.36
TPM3-201ENST00000271850 GIG44P09565 113 aaPredicted RBP6.55□□□□□ -1.36
TPM3-201ENST00000271850 NAT1P18440 290 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 LPAR6P43657 344 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 HSPA13P48723 471 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 APOC4P55056 127 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 SCAND1P57086 179 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 NANOS2P60321 138 aaKnown RBP6.55□□□□□ -1.36
TPM3-201ENST00000271850 CATR1Q13166 79 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 DHRS11Q6UWP2 260 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 FAM24BQ8N5W8 94 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 DMBX1Q8NFW5 382 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 OR1L8Q8NGR8 309 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 PHLDA1Q8WV24 401 aaPredicted RBP6.55□□□□□ -1.36
TPM3-201ENST00000271850 LSM10Q969L4 123 aaKnown RBP6.55□□□□□ -1.36
TPM3-201ENST00000271850 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 ZNF2Q9BSG1 426 aaPredicted RBP6.55□□□□□ -1.36
TPM3-201ENST00000271850 C20orf24Q9BUV8 137 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 TMEM14BQ9NUH8 114 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 SMPXQ9UHP9 88 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 SSR3Q9UNL2 185 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 OR51B2Q9Y5P1 312 aa6.55□□□□□ -1.36
TPM3-201ENST00000271850 IGHV3OR16-13A0A075B7E8 117 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 A0A0A6YYH2 397 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 IGHV3-74A0A0B4J1X5 117 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 IGHV7-4-1A0A0J9YVY3 117 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 LOC100506127A0A0U1RQW1 187 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 A6NJ64 397 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 C15orf62A8K5M9 175 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 UBE2CO00762 179 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 KRASP01116 189 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 PMP2P02689 132 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 F2RP25116 425 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 SPSB3Q6PJ21 355 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 LYSMD2Q8IV50 215 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 SLC38A6Q8IZM9 456 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 CADM3Q8N126 398 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 UBAC2Q8NBM4 344 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 CD300LFQ8TDQ1 290 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 FCGR1BQ92637 280 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 GALNT14Q96FL9 552 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 ATP6V0BQ99437 205 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 RHPN1-AS1Q9BWJ2 59 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 HINT2Q9BX68 163 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 EHFQ9NZC4 300 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 THYN1Q9P016 225 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 PKD1P98161 4303 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 RYR1P21817 5038 aa6.54□□□□□ -1.36
TPM3-201ENST00000271850 IGKV3-7A0A075B6H7 116 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms