RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TANC1Q9C0D5 1861 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 RBFOX2O43251 390 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS33A-201ENST00000267199 CLDN18P56856 261 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 ARF6P62330 175 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 RPL8P62917 257 aaKnown RBP9.69□□□□□ -0.86
VPS33A-201ENST00000267199 MOSP00540 346 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 ZFP36L1Q07352 338 aaKnown RBP9.69□□□□□ -0.86
VPS33A-201ENST00000267199 LCN12Q6JVE5 192 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 ZNF841Q6ZN19 808 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 GGNQ86UU5 652 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 OR13A1Q8NGR1 328 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 SNRNP40Q96DI7 357 aaKnown RBP9.69□□□□□ -0.86
VPS33A-201ENST00000267199 HSPB7Q9UBY9 170 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 TRAV24A0A0B4J272 114 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 A0A0G2JRQ6 117 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 F5H697 171 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 FBLN7Q53RD9 439 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 LINC01551Q86U37 167 aa9.69□□□□□ -0.86
VPS33A-201ENST00000267199 COL25A1Q9BXS0 654 aaPredicted RBP9.69□□□□□ -0.86
VPS33A-201ENST00000267199 MUC21A0A0G2JKD1 596 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 MUC21A0A140T8X8 626 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 SLC25A17O43808 307 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 CKS2P33552 79 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 MUC21Q5SSG8 566 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 Q6ZT83 130 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 ZNF430Q9H8G1 570 aaPredicted RBP9.68□□□□□ -0.86
VPS33A-201ENST00000267199 PEF1Q9UBV8 284 aaKnown RBP9.68□□□□□ -0.86
VPS33A-201ENST00000267199 KLF2Q9Y5W3 355 aaPredicted RBP9.68□□□□□ -0.86
VPS33A-201ENST00000267199 AHRRA9YTQ3 701 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 ZNF324O75467 553 aaPredicted RBP9.68□□□□□ -0.86
VPS33A-201ENST00000267199 FOXC1Q12948 553 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 AP5S1Q9NUS5 200 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 SLC25A10Q9UBX3 287 aaPredicted RBP9.68□□□□□ -0.86
VPS33A-201ENST00000267199 HIGD1AQ9Y241 93 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 TICRRQ7Z2Z1 1910 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 FAM90A27PA6NNH2 459 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 PPIAL4DF5H284 164 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 SMIM17P0DL12 118 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 PRRX1P54821 245 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 GNB2P62879 340 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 PEAR1Q5VY43 1037 aaPredicted RBP9.68□□□□□ -0.86
VPS33A-201ENST00000267199 DNM1P46Q6ZS02 220 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 INSIG2Q9Y5U4 225 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 TRAV1-1A0A0B4J248 108 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 J3QW42 95 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 HBBP68871 147 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 TWIST1Q15672 202 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 EAF1Q96JC9 268 aaPredicted RBP9.68□□□□□ -0.86
VPS33A-201ENST00000267199 HILPDAQ9Y5L2 63 aa9.68□□□□□ -0.86
VPS33A-201ENST00000267199 IGKV3-7A0A075B6H7 116 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 C16orf97H3BN30 126 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 PSMB2P49721 201 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 GOLT1AQ6ZVE7 132 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 FDCSPQ8NFU4 85 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 C1orf147Q96MC9 270 aaPredicted RBP9.67□□□□□ -0.86
VPS33A-201ENST00000267199 PPIAL4AQ9Y536 164 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 WIPF3A6NGB9 483 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 CECR9P0C854 216 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 TIMP3P35625 211 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 SELENOTP62341 195 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 HOXA4Q00056 320 aaPredicted RBP9.67□□□□□ -0.86
VPS33A-201ENST00000267199 Q6ZRM9 215 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 OR10AG1Q8NH19 301 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 JPT1Q9UK76 154 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 CDC42EP3Q9UKI2 254 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 IGKV1-5P01602 117 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 FTH1P19P0C7X4 201 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 PRB4P10163 310 aaPredicted RBP9.67□□□□□ -0.86
VPS33A-201ENST00000267199 TDGF1P3P51864 188 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 Q5PR19 223 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 WFDC3Q8IUB2 231 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 C1orf174Q8IYL3 243 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
VPS33A-201ENST00000267199 MRPS18CQ9Y3D5 142 aaKnown RBP9.67□□□□□ -0.86
VPS33A-201ENST00000267199 BDP1A6H8Y1 2624 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 HIGD1CA8MV81 97 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 DLL1O00548 723 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 PPIHO43447 177 aaKnown RBP9.66□□□□□ -0.86
VPS33A-201ENST00000267199 TMEM50AO95807 157 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 RPL27AP46776 148 aaKnown RBP9.66□□□□□ -0.86
VPS33A-201ENST00000267199 TBR1Q16650 682 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 FAM201AQ5SY85 155 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 ACP7Q6ZNF0 438 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 GCSAMQ8N6F7 178 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 ARL6IP6Q8N6S5 226 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 PPIAL4EA0A075B759 164 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 C9orf172C9J069 976 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 LIPFP07098 398 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 PPIAL4FP0DN26 164 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 CA7P43166 264 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 DNLZQ5SXM8 178 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 LIME1Q9H400 295 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 LPAR2Q9HBW0 351 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 OR2T8A6NH00 312 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 NTN3O00634 580 aaPredicted RBP9.66□□□□□ -0.86
VPS33A-201ENST00000267199 SP9P0CG40 484 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 TCF24Q7RTU0 167 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms