RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 OR2T6Q8NHC8 308 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 ZCCHC14Q8WYQ9 949 aaKnown RBP13.78□□□□□ -0.2
SQLE-201ENST00000265896 FAM168AQ92567 244 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 WNT10AQ9GZT5 417 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 TMPRSS2O15393 492 aa13.77□□□□□ -0.2
SQLE-201ENST00000265896 ADH4P08319 380 aa13.77□□□□□ -0.2
SQLE-201ENST00000265896 EAF1Q96JC9 268 aaPredicted RBP13.77□□□□□ -0.2
SQLE-201ENST00000265896 BTF3L4Q96K17 158 aa13.77□□□□□ -0.2
SQLE-201ENST00000265896 SH3BGRL2Q9UJC5 107 aa13.77□□□□□ -0.2
SQLE-201ENST00000265896 OR51B2Q9Y5P1 312 aa13.77□□□□□ -0.2
SQLE-201ENST00000265896 DYSFO75923 2080 aa13.77□□□□□ -0.2
SQLE-201ENST00000265896 ZGRF1Q86YA3 2104 aa13.77□□□□□ -0.2
SQLE-201ENST00000265896 CD24P25063 80 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 CCL8P80075 99 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 DEFB109BQ30KR1 87 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 GNB4Q9HAV0 340 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 PLEKHA3Q9HB20 300 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 TMEM106BQ9NUM4 274 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 J3QR06 171 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 REG1AP05451 166 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 PAX1P15863 534 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 CCKARP32238 428 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 GNG4P50150 75 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 FOXL1Q12952 345 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 MAJINQ3KP22 176 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 FAM90A1Q86YD7 464 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 NABP2Q9BQ15 211 aa13.77□□□□□ -0.21
SQLE-201ENST00000265896 HELTA6NFD8 242 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 E7EUB6 86 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 PYYP10082 97 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 Q6ZVH6 145 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 IDI2-AS1Q9NZ38 188 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 AKAP6Q13023 2319 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 RHOBP62745 196 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 DIAPH2-AS1Q14236 149 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 C17orf58Q2M2W7 97 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 DIRC2Q96SL1 478 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 FBXL7Q9UJT9 491 aa13.76□□□□□ -0.21
SQLE-201ENST00000265896 M0R143 59 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 MGST3O14880 152 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 SP9P0CG40 484 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 TRIP6Q15654 476 aaKnown RBP13.75□□□□□ -0.21
SQLE-201ENST00000265896 DBX2Q6ZNG2 339 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 TP73-AS1Q9UF72 201 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 COL27A1Q8IZC6 1860 aaPredicted RBP13.75□□□□□ -0.21
SQLE-201ENST00000265896 C15orf61A6NNL5 157 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 SRRM5B3KS81 715 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 GGTLC3B5MD39 225 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 TOX4O94842 621 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 CHRNB4P30926 498 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 GPR6P46095 362 aaPredicted RBP13.75□□□□□ -0.21
SQLE-201ENST00000265896 C1orf194Q5T5A4 169 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 STARD4Q96DR4 205 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 IL36BQ9NZH7 164 aa13.75□□□□□ -0.21
SQLE-201ENST00000265896 LSM4Q9Y4Z0 139 aaKnown RBP13.75□□□□□ -0.21
SQLE-201ENST00000265896 TLN1Q9Y490 2541 aaKnown RBP13.75□□□□□ -0.21
SQLE-201ENST00000265896 AMTP48728 403 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 RPP30P78346 268 aaKnown RBP13.74□□□□□ -0.21
SQLE-201ENST00000265896 LCN12Q6JVE5 192 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 BHLHA15Q7RTS1 189 aaPredicted RBP13.74□□□□□ -0.21
SQLE-201ENST00000265896 OR4S2Q8NH73 311 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 ZNF503Q96F45 646 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 TNFSF13O75888 250 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 CCL3L1P16619 93 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 RPEL1Q2QD12 228 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 PRR7Q8TB68 274 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 SSBP4Q9BWG4 385 aaPredicted RBP13.74□□□□□ -0.21
SQLE-201ENST00000265896 NPSP0C0P6 89 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 SRIP30626 198 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 HSPE1P61604 102 aaKnown RBP13.74□□□□□ -0.21
SQLE-201ENST00000265896 TPTE2P1Q5T6R2 138 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 JPT1Q9UK76 154 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 PROCRQ9UNN8 238 aa13.74□□□□□ -0.21
SQLE-201ENST00000265896 IGHV3-72A0A0B4J1Y9 119 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 LINC00869P0C866 280 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 TPPP2P59282 170 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 FAM27E3Q08E93 113 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 NEU1Q99519 415 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 ZNF71Q9NQZ8 489 aaPredicted RBP13.73□□□□□ -0.21
SQLE-201ENST00000265896 DKK4Q9UBT3 224 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 V9GYV3 84 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 ZNF292O60281 2723 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 WNK2Q9Y3S1 2297 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 A0A1W2PN81 502 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 RAB1CQ92928 201 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 ASCL2Q99929 193 aa13.73□□□□□ -0.21
SQLE-201ENST00000265896 TBL2Q9Y4P3 447 aaKnown RBP13.73□□□□□ -0.21
SQLE-201ENST00000265896 TIMM8BQ9Y5J9 83 aaPredicted RBP13.73□□□□□ -0.21
SQLE-201ENST00000265896 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 ZNF253O75346 499 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 SEM1Q6ZVN7 128 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 DEFB124Q8NES8 71 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 VAMP8Q9BV40 100 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 A8MXE2 369 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 YPEL1O60688 119 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 CAMPP49913 170 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 GNG5P63218 68 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 SIGLECL1Q8N7X8 197 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms