RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 BHLHA15Q7RTS1 189 aaPredicted RBP7.28□□□□□ -1.24
VAPB-201ENST00000265619 TMEM45BQ96B21 275 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 NPFFR1Q9GZQ6 430 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 CEACAM21Q3KPI0 293 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 ZNF788Q6ZQV5 615 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 FGF23Q9GZV9 251 aaPredicted RBP7.28□□□□□ -1.24
VAPB-201ENST00000265619 COL6A6A6NMZ7 2263 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 ZNF318Q5VUA4 2279 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 AKAP13Q12802 2813 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 LRP5LA4QPB2 252 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.27□□□□□ -1.25
VAPB-201ENST00000265619 MT-CO2P00403 227 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 APCSP02743 223 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 OR8B8Q15620 311 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 FOXL2NBQ6ZUU3 175 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
VAPB-201ENST00000265619 NABP1Q96AH0 204 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 TMEM147Q9BVK8 224 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 PLEK2Q9NYT0 353 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 A0A1W2PQD3 144 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 G6PCP35575 357 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 SRYQ05066 204 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 PQLC2Q6ZP29 291 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 ZNF611Q8N823 705 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 SCCPDHQ8NBX0 429 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 OR5A2Q8NGI9 324 aa7.27□□□□□ -1.25
VAPB-201ENST00000265619 TSSC4Q9Y5U2 329 aaPredicted RBP7.27□□□□□ -1.25
VAPB-201ENST00000265619 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 CDX4O14627 284 aaPredicted RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 SMAD7O15105 426 aaKnown RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 KLK10O43240 276 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 RPL24P83731 157 aaKnown RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 FGFRL1Q8N441 504 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 ZBTB34Q8NCN2 500 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 PIGCQ92535 297 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 ZNF488Q96MN9 340 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 C18orf15Q96N68 181 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 C19orf24Q9BVV8 132 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 ALKBH4Q9NXW9 302 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 OR51B2Q9Y5P1 312 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 NCKAP5O14513 1909 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 CKS1BP61024 79 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 CENPWQ5EE01 88 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 MIC13Q5XKP0 118 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 YRDCQ86U90 279 aaKnown RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 SPTAN1Q13813 2472 aaKnown RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 DMXL2Q8TDJ6 3036 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 J3QR06 171 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 K7EP34 96 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 MT-CO3P00414 261 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 USF1P22415 310 aaPredicted RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 PLP1P60201 277 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 SRSF6Q13247 344 aaKnown RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 Q6ZR03 302 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 Q6ZSR3 168 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 TMEM116Q8NCL8 245 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 ATRXP46100 2492 aa7.26□□□□□ -1.25
VAPB-201ENST00000265619 ANKRD11Q6UB99 2663 aaPredicted RBP7.26□□□□□ -1.25
VAPB-201ENST00000265619 NPIPB13A6NJU9 1138 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 NPIPB4C9JG80 1138 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 AMY1AP04745 511 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 CCL3P10147 92 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 CD59P13987 128 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 GPR183P32249 361 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 NRN1LQ496H8 165 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 C12orf54Q6X4T0 127 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 RPS19BP1Q86WX3 136 aaKnown RBP7.25□□□□□ -1.25
VAPB-201ENST00000265619 TMEM70Q9BUB7 260 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 ULBP2Q9BZM5 246 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 OR2W1Q9Y3N9 320 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 DCHS1Q96JQ0 3298 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 TRAV9-1A0A075B6T8 112 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 TRBV9A0A0B4J1U6 114 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 F2RL2O00254 374 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 TGFAP01135 160 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 CRYBB3P26998 211 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 ZNF138P52744 262 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 ZNF816Q0VGE8 651 aaPredicted RBP7.25□□□□□ -1.25
VAPB-201ENST00000265619 IL11RAQ14626 422 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 RNFT1Q5M7Z0 435 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 TEX45Q8NA69 505 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 OR52E5Q8NH55 327 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 LSM10Q969L4 123 aaKnown RBP7.25□□□□□ -1.25
VAPB-201ENST00000265619 ST20Q9HBF5 79 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 MTCH1Q9NZJ7 389 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 A0A1W2PPV4 95 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 VWC2LB2RUY7 222 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 CRYGCP07315 174 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 FOXA3P55318 350 aaPredicted RBP7.25□□□□□ -1.25
VAPB-201ENST00000265619 SSX8Q7RTT4 187 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 FAM222BQ8WU58 562 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 CACNG8Q8WXS5 425 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 SIGMAR1Q99720 223 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 SERTAD4Q9NUC0 356 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 TIMM8BQ9Y5J9 83 aaPredicted RBP7.25□□□□□ -1.25
VAPB-201ENST00000265619 PRR14LQ5THK1 2151 aa7.25□□□□□ -1.25
VAPB-201ENST00000265619 DYSFO75923 2080 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 TET2Q6N021 2002 aaPredicted RBP7.24□□□□□ -1.25
VAPB-201ENST00000265619 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 SPINK14Q6IE38 97 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms