RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MOB4Q9Y3A3 225 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 IZUMO1RA6ND01 250 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 PRR33A8MZF0 331 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 CD24P25063 80 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 CIRBPQ14011 172 aaKnown RBP10.15□□□□□ -0.78
SMG6-201ENST00000263073 OR52E5Q8NH55 327 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 LYZL4Q96KX0 146 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 MYOFQ9NZM1 2061 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 IGHV3-64A0A075B6Q5 118 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 RNASE4P34096 147 aaKnown RBP10.15□□□□□ -0.78
SMG6-201ENST00000263073 MESP1Q9BRJ9 268 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 PRDM13Q9H4Q3 707 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 SCN4AP35499 1836 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 GZMBP10144 247 aa10.15□□□□□ -0.79
SMG6-201ENST00000263073 FAM159AQ6UWV7 190 aa10.15□□□□□ -0.79
SMG6-201ENST00000263073 BMPERQ8N8U9 685 aa10.15□□□□□ -0.79
SMG6-201ENST00000263073 JMJD8Q96S16 334 aa10.15□□□□□ -0.79
SMG6-201ENST00000263073 HEPN1Q6WQI6 88 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 SHISA5Q8N114 240 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 LINC01560Q8TB33 94 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 TRAV8-2A0A0B4J237 113 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 NPFFO15130 113 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 NPPCP23582 126 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 UCP1P25874 307 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
SMG6-201ENST00000263073 TIMP4Q99727 224 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 MRPL20Q9BYC9 149 aaKnown RBP10.14□□□□□ -0.79
SMG6-201ENST00000263073 A0A1B0GUT8 65 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 DNAL4O96015 105 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 CD33P20138 364 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 OCC1Q8TAD7 63 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 A0A1W2PS18 150 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 COLCA2A8K830 154 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 IGFBP3P17936 291 aaPredicted RBP10.14□□□□□ -0.79
SMG6-201ENST00000263073 TMPRSS3P57727 454 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 OR9G1Q8NH87 305 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 DIRC2Q96SL1 478 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 OR5A1Q8NGJ0 315 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 TMEM106BQ9NUM4 274 aa10.14□□□□□ -0.79
SMG6-201ENST00000263073 POLR2AP24928 1970 aaKnown RBP10.13□□□□□ -0.79
SMG6-201ENST00000263073 NPIPB11E5RHQ5 1161 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 C10orf128Q5T292 105 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 HIST3H2BBQ8N257 126 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 NUDT10Q8NFP7 164 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 NPIPB4C9JG80 1138 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 HGFACQ04756 655 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 SMAGPQ0VAQ4 97 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 TMEM171Q8WVE6 324 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 ZNF319Q9P2F9 582 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 TRAV5A0A0B4J249 113 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 SAA1P0DJI8 122 aaPredicted RBP10.13□□□□□ -0.79
SMG6-201ENST00000263073 MCRIP2Q9BUT9 160 aaKnown RBP10.13□□□□□ -0.79
SMG6-201ENST00000263073 CLEC7AQ9BXN2 247 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 IGKV1-9A0A0C4DH69 117 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 IGKV1D-33P01593 117 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 IGKV1-33P01594 117 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 AMBPP02760 352 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 LRTM2Q8N967 370 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 CHCHD2Q9Y6H1 151 aaPredicted RBP10.13□□□□□ -0.79
SMG6-201ENST00000263073 RGPD3A6NKT7 1758 aaPredicted RBP10.13□□□□□ -0.79
SMG6-201ENST00000263073 NPC2P61916 151 aa10.13□□□□□ -0.79
SMG6-201ENST00000263073 MEF2CQ06413 473 aaPredicted RBP10.13□□□□□ -0.79
SMG6-201ENST00000263073 LOC105371242A0A075B767 164 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 CEACAM4O75871 244 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 FAM27E3Q08E93 113 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 PAQR4Q8N4S7 273 aaPredicted RBP10.12□□□□□ -0.79
SMG6-201ENST00000263073 DNASE2BQ8WZ79 361 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 ALPK2Q86TB3 2170 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 IGHV1-69-2A0A0G2JMI3 117 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 A0A0U1RRA0 63 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 TMEM50AO95807 157 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 CA7P43166 264 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 SPOCK3Q9BQ16 436 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 VKORC1Q9BQB6 163 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 ANKRD36A6QL64 1941 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 CLEC19AQ6UXS0 136 aa10.12□□□□□ -0.79
SMG6-201ENST00000263073 TRAV30A0A087WSZ9 112 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 F8VVB4 439 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 F8VWA3 439 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 CACNG7P62955 275 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 FOXL1Q12952 345 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 TMEM186Q96B77 213 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 CD69Q07108 199 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 SAPCD1Q5SSQ6 148 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 ZCCHC24Q8N2G6 241 aaKnown RBP10.11□□□□□ -0.79
SMG6-201ENST00000263073 C19orf24Q9BVV8 132 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 ELOVL5Q9NYP7 299 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 FOXH1O75593 365 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 CCL3L1P16619 93 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 IGLV3-21P80748 117 aaPredicted RBP10.11□□□□□ -0.79
SMG6-201ENST00000263073 SPATA31B1PQ5VZV4 182 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 FER1L6-AS1Q8NA97 138 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 ASCL2Q99929 193 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 SEC16AO15027 2179 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 LOC390937A0A1W2PQ73 354 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 FMC1Q96HJ9 113 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 REG4Q9BYZ8 158 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 TMEM256Q8N2U0 113 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms