RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 IGKV1-33P01594 117 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 GNB2P62879 340 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 SLC35E3Q7Z769 313 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 LPAR2Q9HBW0 351 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 TCF19Q9Y242 345 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 MEF2CQ06413 473 aaPredicted RBP11.06□□□□□ -0.64
VMP1-201ENST00000262291 ACSM6Q6P461 480 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 LINC00574Q9H8X3 128 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 CACNA1BQ00975 2339 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 BPIFB3P59826 476 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 TMEM170AQ8WVE7 144 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 FAM122AQ96E09 287 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 RBFOX2O43251 390 aaKnown RBP eCLIP11.05□□□□□ -0.64
VMP1-201ENST00000262291 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 CLDND2Q8NHS1 167 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 RNASE8Q8TDE3 154 aaKnown RBP11.05□□□□□ -0.64
VMP1-201ENST00000262291 TMEM147Q9BVK8 224 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 SLC25A22Q9H936 323 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 CSMD1Q96PZ7 3565 aa11.05□□□□□ -0.64
VMP1-201ENST00000262291 ZNF705FA8MVS1 300 aaPredicted RBP11.04□□□□□ -0.64
VMP1-201ENST00000262291 ITGB1BP1O14713 200 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 NDUFS7O75251 213 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 HSPB1P04792 205 aaKnown RBP11.04□□□□□ -0.64
VMP1-201ENST00000262291 LINC00614P0C842 121 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 ZNF705DP0CH99 300 aaPredicted RBP11.04□□□□□ -0.64
VMP1-201ENST00000262291 ZNF705BP0CI00 300 aaPredicted RBP11.04□□□□□ -0.64
VMP1-201ENST00000262291 COX7A1P24310 79 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 KIR2DS2P43631 304 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 GCSAMLQ5JQS6 135 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 CIB3Q96Q77 187 aaPredicted RBP11.04□□□□□ -0.64
VMP1-201ENST00000262291 FUT9Q9Y231 359 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 VDAC2P45880 294 aaPredicted RBP11.04□□□□□ -0.64
VMP1-201ENST00000262291 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.04□□□□□ -0.64
VMP1-201ENST00000262291 RITA1Q96K30 269 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 SPOCK3Q9BQ16 436 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 SMDT1Q9H4I9 107 aa11.04□□□□□ -0.64
VMP1-201ENST00000262291 C15orf61A6NNL5 157 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 C19orf84I3L1E1 186 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 J3QR06 171 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 SAA1P0DJI8 122 aaPredicted RBP11.03□□□□□ -0.64
VMP1-201ENST00000262291 CDKN1AP38936 164 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 DLX6P56179 175 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 TLE4Q04727 773 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 GAGE1Q13065 139 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 TMEM155Q4W5P6 130 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 ZNF506Q5JVG8 444 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 FFAR4Q5NUL3 377 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 HIPK2Q9H2X6 1198 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 FKBP11Q9NYL4 201 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 OR51B2Q9Y5P1 312 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 ZFYVE26Q68DK2 2539 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 RND2P52198 227 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 RTL8BQ17RB0 113 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 ZNF787Q6DD87 383 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 RPP25LQ8N5L8 163 aaKnown RBP11.03□□□□□ -0.64
VMP1-201ENST00000262291 C11orf42Q8N5U0 333 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 OR10W1Q8NGF6 305 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 HARBI1Q96MB7 349 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 DNAJC4Q9NNZ3 241 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 IGSF10Q6WRI0 2623 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 WNK2Q9Y3S1 2297 aa11.03□□□□□ -0.64
VMP1-201ENST00000262291 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.64
VMP1-201ENST00000262291 ENSAO43768 121 aaKnown RBP11.02□□□□□ -0.64
VMP1-201ENST00000262291 IGHV1-8P0DP01 117 aa11.02□□□□□ -0.64
VMP1-201ENST00000262291 BRS3P32247 399 aa11.02□□□□□ -0.64
VMP1-201ENST00000262291 ADIRFQ15847 76 aa11.02□□□□□ -0.64
VMP1-201ENST00000262291 C1orf194Q5T5A4 169 aa11.02□□□□□ -0.64
VMP1-201ENST00000262291 ZNF833PQ6ZTB9 187 aa11.02□□□□□ -0.64
VMP1-201ENST00000262291 TMEM18Q96B42 140 aa11.02□□□□□ -0.64
VMP1-201ENST00000262291 A0A1W2PPQ1 181 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 H0YJW9 148 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 HRASP01112 189 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 C10orf55Q5SWW7 151 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 ZNF841Q6ZN19 808 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 MOB3BQ86TA1 216 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 PINX1Q96BK5 328 aaKnown RBP11.02□□□□□ -0.65
VMP1-201ENST00000262291 ADTRPQ96IZ2 230 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 PCGF1Q9BSM1 259 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 TMEM204Q9BSN7 226 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 NPCDR1Q9BY65 106 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 KAAG1Q9UBP8 84 aa11.02□□□□□ -0.65
VMP1-201ENST00000262291 TMEM41BQ5BJD5 291 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 GATAD1Q8WUU5 269 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 TBX15Q96SF7 602 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 A0A1W2PRD5 423 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 A0A1W2PRF3 423 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 A0A1W2PRM7 423 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 MAP1LC3B2A6NCE7 125 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 E7EUB6 86 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 CA2P00918 260 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 PSMG3Q9BT73 122 aaPredicted RBP11.01□□□□□ -0.65
VMP1-201ENST00000262291 MAP1LC3BQ9GZQ8 125 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 SRD5A3Q9H8P0 318 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 UBTD1Q9HAC8 227 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 TPSG1Q9NRR2 321 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 TMEM14BQ9NUH8 114 aa11.01□□□□□ -0.65
VMP1-201ENST00000262291 ONECUT1Q9UBC0 465 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms