RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 Q71RC1 249 aaPredicted RBP10.7□□□□□ -0.7
SNX1-201ENST00000261889 PKIBQ9C010 78 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 CLEC5AQ9NY25 188 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 TECRQ9NZ01 308 aaKnown RBP10.7□□□□□ -0.7
SNX1-201ENST00000261889 OOEPA6NGQ2 149 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 TYMSP04818 313 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 ZNF146Q15072 292 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 MSMPQ1L6U9 139 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 ACP7Q6ZNF0 438 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 EAF1Q96JC9 268 aaPredicted RBP10.69□□□□□ -0.7
SNX1-201ENST00000261889 HIPK2Q9H2X6 1198 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 ZNF355PQ9NSJ1 428 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 TIMM9Q9Y5J7 89 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 IGKV1OR2-108A0A075B7D4 117 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 TRBV6-6A0A0A6YYG2 114 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 MMP23AO75900 390 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 IGKV1-16P04430 117 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 GNG4P50150 75 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 ZNF83P51522 516 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 GNG5P63218 68 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 C10orf55Q5SWW7 151 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 MIEN1Q9BRT3 115 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 PLEKHA3Q9HB20 300 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 KCNIP2Q9NS61 270 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 SNAI2O43623 268 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 REG1AP05451 166 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 SSPNQ14714 243 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 TMEM183BQ1AE95 376 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 WIPI2Q9Y4P8 454 aa10.69□□□□□ -0.7
SNX1-201ENST00000261889 A0A1W2PRD5 423 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 A0A1W2PRF3 423 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 A0A1W2PRM7 423 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 CORTO00230 105 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 VENTXO95231 258 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 STAG3L2P0CL84 134 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 STAG3L3P0CL85 134 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 RPL8P62917 257 aaKnown RBP10.68□□□□□ -0.7
SNX1-201ENST00000261889 SLAQ13239 276 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 SRSF7Q16629 238 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNX1-201ENST00000261889 TRAT1Q6PIZ9 186 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 RAB29O14966 203 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 YPEL1O60688 119 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 LCN2P80188 198 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 RPEL1Q2QD12 228 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 MOB1BQ7L9L4 216 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 YPEL2Q96QA6 119 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 SPRY4Q9C004 299 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 HELTA6NFD8 242 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 DLL1O00548 723 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 SPINT2O43291 252 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 ZNF137PP52743 207 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 ERVK-16P61578 105 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 MOGAT3Q86VF5 341 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 OR2T6Q8NHC8 308 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 S1PR3Q99500 378 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 IL36BQ9NZH7 164 aa10.68□□□□□ -0.7
SNX1-201ENST00000261889 GGTLC3B5MD39 225 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 C3orf79P0CE67 100 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 PRDX2P32119 198 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 ZNF138P52744 262 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 ATP6V1FQ16864 119 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 ZNF766Q5HY98 468 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 ETFRF1Q6IPR1 90 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 RNASEKQ6P5S7 137 aaKnown RBP10.67□□□□□ -0.7
SNX1-201ENST00000261889 RNASE8Q8TDE3 154 aaKnown RBP10.67□□□□□ -0.7
SNX1-201ENST00000261889 BLNKQ8WV28 456 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 LINC00470Q9BZP3 86 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 A0A1W2PS18 150 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 FAM90A26D6RGX4 464 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 TNFSF13O75888 250 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 CXorf1O96002 111 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 LBHQ53QV2 105 aaPredicted RBP10.67□□□□□ -0.7
SNX1-201ENST00000261889 GMPPAQ96IJ6 420 aaPredicted RBP10.67□□□□□ -0.7
SNX1-201ENST00000261889 V9GYV3 84 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 CELSR1Q9NYQ6 3014 aa10.67□□□□□ -0.7
SNX1-201ENST00000261889 IGKV1D-17A0A075B6S4 117 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 TRGV5A0A0B4J1U4 118 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 A0A1B0GWJ7 208 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 OR5G3P0C626 314 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 CCL11P51671 97 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 FOXL1Q12952 345 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 ZNF718Q3SXZ3 478 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 LEMD1Q68G75 181 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 IGFBPL1Q8WX77 278 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 SP1P08047 785 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 CECR9P0C854 216 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 NPY1RP25929 384 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 EIF4EBP1Q13541 118 aaPredicted RBP10.66□□□□□ -0.7
SNX1-201ENST00000261889 SLC35E4Q6ICL7 350 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 LINC00173Q6ZV60 143 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 TAAR6Q96RI8 345 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 ZGRF1Q86YA3 2104 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 ATRXP46100 2492 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 TLN1Q9Y490 2541 aaKnown RBP10.66□□□□□ -0.7
SNX1-201ENST00000261889 NPIPB11E5RHQ5 1161 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 NDUFB8O95169 186 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 GPX1P07203 203 aa10.66□□□□□ -0.7
SNX1-201ENST00000261889 WT1P19544 449 aaPredicted RBP10.66□□□□□ -0.7
SNX1-201ENST00000261889 HNRNPA3P51991 378 aaKnown RBP10.66□□□□□ -0.7
SNX1-201ENST00000261889 MRPS11P82912 194 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms