RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 LRRC37A5PQ49AS3 106 aa12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 LAMTOR1Q6IAA8 161 aa12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 INS-IGF2F8WCM5 200 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 WRBO00258 174 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 SOX15O60248 233 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 MED6O75586 246 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 TMEM50AO95807 157 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 PPIFP30405 207 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 CFHR3Q02985 330 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 HSD17B13Q7Z5P4 300 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 OR5T1Q8NG75 326 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 TMEM68Q96MH6 324 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 ENY2Q9NPA8 101 aa12.39□□□□□ -0.43
CCDC90B-201ENST00000260054 NPIPB5A8MRT5 1133 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 CTRB1P17538 263 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 MDKP21741 143 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 PSMB6P28072 239 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 CTRB2Q6GPI1 263 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 C10orf99Q6UWK7 81 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 ZNF329Q86UD4 541 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 C9orf62Q8N4C0 152 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 OR4F5Q8NH21 305 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 HEYLQ9NQ87 328 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 ATRQ13535 2644 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 H0YIZ8 118 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 FBXO24O75426 580 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 CRYGCP07315 174 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 PAX9P55771 341 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 RAP2BP61225 183 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 ERHP84090 104 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 KRTAP24-1Q3LI83 254 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 FAM110DQ8TAY7 271 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 ASB13Q8WXK3 278 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 P2RX4Q99571 388 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 HIPK2Q9H2X6 1198 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 C11orf1Q9H5F2 150 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 HSPB11Q9Y547 144 aa12.38□□□□□ -0.43
CCDC90B-201ENST00000260054 LINC00862A6NCI5 91 aa12.37□□□□□ -0.43
CCDC90B-201ENST00000260054 MPC2O95563 127 aa12.37□□□□□ -0.43
CCDC90B-201ENST00000260054 PRH1P02810 166 aa12.37□□□□□ -0.43
CCDC90B-201ENST00000260054 BSXQ3C1V8 233 aa12.37□□□□□ -0.43
CCDC90B-201ENST00000260054 MRPL41Q8IXM3 137 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-201ENST00000260054 TRAV14DV4A0A0A6YYC5 116 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 CLPSL1A2RUU4 121 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 H3BP45 60 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 DEDDO75618 318 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 RNASE2P10153 161 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 ZNF114Q8NC26 417 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 SLC24A4Q8NFF2 622 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 OR2T35Q8NGX2 323 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 TMEM170AQ8WVE7 144 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 CIB3Q96Q77 187 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 CITED4Q96RK1 184 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 RAB40CQ96S21 281 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 RNF126Q9BV68 326 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 ZFP57Q9NU63 452 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 OR5AC2Q9NZP5 309 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 RNF114Q9Y508 228 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 DMRT1Q9Y5R6 373 aa12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 F11RQ9Y624 299 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-201ENST00000260054 PSMB11A5LHX3 300 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 G3V3Q6 166 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 IGLV1-40P01703 118 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 SNCAP37840 140 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 MFAP2P55001 183 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 CENPVQ7Z7K6 275 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 KLHDC1Q8N7A1 406 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 SMIM8Q96KF7 97 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 FBN1P35555 2871 aaKnown RBP12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 SMLR1H3BR10 107 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 IFNA10P01566 189 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 IGHG4P01861 327 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 DEFA4P12838 97 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 PROK1P58294 105 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 SLC35B1P78383 322 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 OR1P1Q8NH06 330 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 FANCD2OSQ96PS1 177 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 PSENENQ9NZ42 101 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 U3KQ87 197 aa12.35□□□□□ -0.43
CCDC90B-201ENST00000260054 C15orf62A8K5M9 175 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 L7N2F9 121 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 HAX1O00165 279 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 RLN2P04090 185 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 NPY1RP25929 384 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 TAS2R30P59541 319 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 VAMP2P63027 116 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 SPANXN5Q5MJ07 72 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 PRSS54Q6PEW0 395 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 LCNL1Q6ZST4 164 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 MS4A10Q96PG2 267 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 KLK15Q9H2R5 256 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 ZNF355PQ9NSJ1 428 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 MBD2Q9UBB5 411 aa12.34□□□□□ -0.43
CCDC90B-201ENST00000260054 IGLV11-55A0A075B6I3 123 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms