RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 PRR20BP86481 221 aa17.55■□□□□ 0.4
CLN6-201ENST00000249806 PRR20AP86496 221 aa17.55■□□□□ 0.4
CLN6-201ENST00000249806 GAMTQ14353 236 aa17.55■□□□□ 0.4
CLN6-201ENST00000249806 C10orf55Q5SWW7 151 aa17.55■□□□□ 0.4
CLN6-201ENST00000249806 ZNF841Q6ZN19 808 aa17.55■□□□□ 0.4
CLN6-201ENST00000249806 WASHC3Q9Y3C0 194 aa17.55■□□□□ 0.4
CLN6-201ENST00000249806 FOXH1O75593 365 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 LY6HO94772 140 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 CXorf1O96002 111 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 LINC00869P0C866 280 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 GATA2P23769 480 aaPredicted RBP17.54■□□□□ 0.4
CLN6-201ENST00000249806 ZNF137PP52743 207 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 FAM71F2Q6NXP2 309 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 C16orf82Q7Z2V1 217 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 OR1L8Q8NGR8 309 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 KCNIP2Q9NS61 270 aa17.54■□□□□ 0.4
CLN6-201ENST00000249806 USF1P22415 310 aaPredicted RBP17.53■□□□□ 0.4
CLN6-201ENST00000249806 TMEM144Q7Z5S9 345 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 TMEM167AQ8TBQ9 72 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 DERL1Q9BUN8 251 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 ZNF98A6NK75 572 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 CGB1A6NKQ9 187 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 FNDC10F2Z333 226 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 NDUFB4O95168 129 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 FAM210BQ96KR6 192 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 CTDSP1Q9GZU7 261 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 ZNF430Q9H8G1 570 aaPredicted RBP17.53■□□□□ 0.4
CLN6-201ENST00000249806 SLC45A2Q9UMX9 530 aa17.53■□□□□ 0.4
CLN6-201ENST00000249806 ACTL6BO94805 426 aa17.52■□□□□ 0.4
CLN6-201ENST00000249806 TRGC2P03986 189 aa17.52■□□□□ 0.4
CLN6-201ENST00000249806 RHOBP62745 196 aa17.52■□□□□ 0.4
CLN6-201ENST00000249806 NECAP1Q8NC96 275 aa17.52■□□□□ 0.4
CLN6-201ENST00000249806 OR5T1Q8NG75 326 aa17.52■□□□□ 0.4
CLN6-201ENST00000249806 C12orf57Q99622 126 aa17.52■□□□□ 0.4
CLN6-201ENST00000249806 TPSG1Q9NRR2 321 aa17.52■□□□□ 0.4
CLN6-201ENST00000249806 METTL1Q9UBP6 276 aaKnown RBP17.52■□□□□ 0.4
CLN6-201ENST00000249806 SPTBN1Q01082 2364 aaKnown RBP17.52■□□□□ 0.4
CLN6-201ENST00000249806 TRBV23-1A0A0A0MS06 115 aa17.52■□□□□ 0.39
CLN6-201ENST00000249806 ENSAO43768 121 aaKnown RBP17.52■□□□□ 0.39
CLN6-201ENST00000249806 SLC25A17O43808 307 aa17.52■□□□□ 0.39
CLN6-201ENST00000249806 PDE6DO43924 150 aa17.52■□□□□ 0.39
CLN6-201ENST00000249806 NDUFS6O75380 124 aaKnown RBP17.52■□□□□ 0.39
CLN6-201ENST00000249806 AURKAIP1Q9NWT8 199 aaPredicted RBP17.52■□□□□ 0.39
CLN6-201ENST00000249806 AP4M1O00189 453 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 IGHV2-70P01814 119 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 PPOXP50336 477 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 ERHP84090 104 aaKnown RBP17.51■□□□□ 0.39
CLN6-201ENST00000249806 WT1-ASQ06250 92 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 FAM78BQ5VT40 261 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 VSTM2AQ8TAG5 236 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 IGHV2-26A0A0B4J1V2 119 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 OR10J1P30954 320 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 CD69Q07108 199 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 OR4P4Q8NGL7 312 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 PCGF1Q9BSM1 259 aa17.51■□□□□ 0.39
CLN6-201ENST00000249806 YTHDF2Q9Y5A9 579 aaKnown RBP17.51■□□□□ 0.39
CLN6-201ENST00000249806 ARHGAP32A7KAX9 2087 aa17.5■□□□□ 0.39
CLN6-201ENST00000249806 PCP4L1A6NKN8 68 aa17.5■□□□□ 0.39
CLN6-201ENST00000249806 GCHFRP30047 84 aa17.5■□□□□ 0.39
CLN6-201ENST00000249806 MIR17HGQ75NE6 70 aa17.5■□□□□ 0.39
CLN6-201ENST00000249806 OR2T6Q8NHC8 308 aa17.5■□□□□ 0.39
CLN6-201ENST00000249806 ATP5IP56385 69 aaPredicted RBP17.49■□□□□ 0.39
CLN6-201ENST00000249806 OR4A5Q8NH83 315 aa17.49■□□□□ 0.39
CLN6-201ENST00000249806 MC5RP33032 325 aa17.49■□□□□ 0.39
CLN6-201ENST00000249806 MRGPRG-AS1Q2M3A8 158 aa17.49■□□□□ 0.39
CLN6-201ENST00000249806 PGPEP1LA6NFU8 196 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 IGLV1-47P01700 117 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 PFN1P07737 140 aaKnown RBP17.48■□□□□ 0.39
CLN6-201ENST00000249806 NANPQ8TBE9 248 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 TRBV24-1A0A075B6N3 115 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 PPIAL4CA0A0B4J2A2 164 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 PPIAL4GP0DN37 164 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 MEOX2P50222 304 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 CLEC12BQ2HXU8 276 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 ACY3Q96HD9 319 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 ELOVL1Q9BW60 279 aa17.48■□□□□ 0.39
CLN6-201ENST00000249806 SCO2A0A1W2PP80 73 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 H7BYZ3 331 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 DLL1O00548 723 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BKO60814 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 VENTXO95231 258 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 IGHV3-48P01763 117 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BJP06899 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 C1QTNF9P0C862 333 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BOP23527 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 IL3RAP26951 378 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 CNTFRP26992 372 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BBP33778 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BDP58876 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BCP62807 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 LY6DQ14210 128 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST2H2BEQ16778 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HLA-DRB5Q30154 266 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BHQ93079 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BNQ99877 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIST1H2BMQ99879 126 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 A0A1W2PN81 502 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 REG1AP05451 166 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 CHRNA7P36544 502 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms