RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ACTL6BO94805 426 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 IGHV2-70P01814 119 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 RNASE2P10153 161 aaKnown RBP15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 FABP4P15090 132 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 CHRNB4P30926 498 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 C2orf83Q53S99 150 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 MIR17HGQ75NE6 70 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 TMEM144Q7Z5S9 345 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 FKBP11Q9NYL4 201 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 PITPNC1Q9UKF7 332 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 SHISA9B4DS77 424 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 E7EUB6 86 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 APOA2P02652 100 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 CD99P14209 185 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 GAMTQ14353 236 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 FAM78BQ5VT40 261 aa15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 DMRTC2Q8IXT2 367 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP1-201ENST00000249014 PTPRZ1P23471 2315 aaPredicted RBP15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 NDUFB3O43676 98 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 GATA2P23769 480 aaPredicted RBP15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 FOXC1Q12948 553 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 ASCL5Q7RTU5 278 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 E7EQL1 145 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 DVL1O14640 695 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 TYMSP04818 313 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 OR1L8Q8NGR8 309 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 NABP2Q9BQ15 211 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 NDUFA4L2Q9NRX3 87 aa15.86■□□□□ 0.13
CDC42EP1-201ENST00000249014 TMEM177Q53S58 311 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 LRRC10Q5BKY1 277 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 SFRP2Q96HF1 295 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 HIST1H2BLQ99880 126 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 HNF1AP20823 631 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 LOXP28300 417 aaPredicted RBP15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 ACTL10Q5JWF8 245 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 KCNIP4Q6PIL6 250 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 OR10X1Q8NGY0 326 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 OR9G1Q8NH87 305 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 OCC1Q8TAD7 63 aa15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 FLYWCH2Q96CP2 140 aaKnown RBP15.85■□□□□ 0.13
CDC42EP1-201ENST00000249014 POLEQ07864 2286 aa15.84■□□□□ 0.13
CDC42EP1-201ENST00000249014 IL3RAP26951 378 aa15.84■□□□□ 0.13
CDC42EP1-201ENST00000249014 OR10J1P30954 320 aa15.84■□□□□ 0.13
CDC42EP1-201ENST00000249014 RPL8P62917 257 aaKnown RBP15.84■□□□□ 0.13
CDC42EP1-201ENST00000249014 PRSS8Q16651 343 aa15.84■□□□□ 0.13
CDC42EP1-201ENST00000249014 TMEM183AQ8IXX5 376 aa15.84■□□□□ 0.13
CDC42EP1-201ENST00000249014 COMMD5Q9GZQ3 224 aa15.84■□□□□ 0.13
CDC42EP1-201ENST00000249014 FUT9Q9Y231 359 aa15.84■□□□□ 0.13
CDC42EP1-201ENST00000249014 DLX6P56179 175 aa15.83■□□□□ 0.13
CDC42EP1-201ENST00000249014 SSX8Q7RTT4 187 aa15.83■□□□□ 0.13
CDC42EP1-201ENST00000249014 ST6GALNAC6Q969X2 333 aa15.83■□□□□ 0.13
CDC42EP1-201ENST00000249014 DYNLRB1Q9NP97 96 aa15.83■□□□□ 0.13
CDC42EP1-201ENST00000249014 ATP5IP56385 69 aaPredicted RBP15.83■□□□□ 0.12
CDC42EP1-201ENST00000249014 CD69Q07108 199 aa15.83■□□□□ 0.12
CDC42EP1-201ENST00000249014 ZNF596Q8TC21 504 aa15.83■□□□□ 0.12
CDC42EP1-201ENST00000249014 TMEM37Q8WXS4 190 aa15.83■□□□□ 0.12
CDC42EP1-201ENST00000249014 ZNF503Q96F45 646 aa15.83■□□□□ 0.12
CDC42EP1-201ENST00000249014 CGB1A6NKQ9 187 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 VSTM5A8MXK1 200 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 MT-CO2P00403 227 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 RD3LP0DJH9 198 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 LCN2P80188 198 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 PSG5Q15238 335 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 OR4C13Q8NGP0 309 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 OR1P1Q8NH06 330 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 C11orf52Q96A22 123 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 PACRGQ96M98 296 aaPredicted RBP15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 CEP295Q9C0D2 2601 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 MDFIC2A0A1B0GVS7 189 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 XKRY2A2RUG3 117 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 K7EN84 100 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 K7ENP7 123 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 C10orf55Q5SWW7 151 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 LINC00311Q8N616 119 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 TMEM167AQ8TBQ9 72 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 TMEM186Q96B77 213 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 SCNM1Q9BWG6 230 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 DMRT1Q9Y5R6 373 aa15.82■□□□□ 0.12
CDC42EP1-201ENST00000249014 IGLV2-23P01705 113 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 USF1P22415 310 aaPredicted RBP15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 FOXL1Q12952 345 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 TEX38Q6PEX7 206 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 PDPNQ86YL7 162 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 SGMS2Q8NHU3 365 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 SLC35E1Q96K37 410 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 IMMP2LQ96T52 175 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 KAAG1Q9UBP8 84 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 NAV3Q8IVL0 2385 aa15.81■□□□□ 0.12
CDC42EP1-201ENST00000249014 FAM87AP0C7U9 286 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 WT1-ASQ06250 92 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 TMEM155Q4W5P6 130 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 COA6Q5JTJ3 125 aaKnown RBP15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 FAM71F2Q6NXP2 309 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 C11orf42Q8N5U0 333 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 C8orf31Q8N9H6 132 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 OR2T6Q8NHC8 308 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 NGBQ9NPG2 151 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 A0A0U1RQK1 487 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 ZNF320A2RRD8 509 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 RPL15P61313 204 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms