RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SMIM8Q96KF7 97 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 LYZL4Q96KX0 146 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 SLC25A33Q9BSK2 321 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 CDX4O14627 284 aaPredicted RBP6.36□□□□□ -1.39
RIF1-201ENST00000243326 ZNF138P52744 262 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 SETD2Q9BYW2 2564 aaPredicted RBP6.36□□□□□ -1.39
RIF1-201ENST00000243326 EPOPA6NHQ4 379 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 PF4V1P10720 104 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 OR13C6PQ8NH95 151 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 A0A087X0K7 114 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 SMKR1H3BMG3 65 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 Q6ZVH6 145 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 OR10AG1Q8NH19 301 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 DSCAML1Q8TD84 2053 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 CYP2G1PQ6ZSU1 146 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 C11orf68Q9H3H3 251 aaKnown RBP6.36□□□□□ -1.39
RIF1-201ENST00000243326 CXorf51AA0A1B0GTR3 108 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 A8MWL6 223 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 FAM71F2Q6NXP2 309 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 TMEM70Q9BUB7 260 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 TMEM265A0A087WTH1 108 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 FADS6Q8N9I5 356 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 CYTL1Q9NRR1 136 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 PATJQ8NI35 1801 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 RFPL3SP0C7P2 107 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 C8orf88P0DMB2 117 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 TMEM170BQ5T4T1 132 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 FAM53AQ6NSI3 398 aaPredicted RBP6.36□□□□□ -1.39
RIF1-201ENST00000243326 TDHQ8IZJ6 230 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 GRAMD2BQ96HH9 432 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 ZNF414Q96IQ9 312 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 ALX4Q9H161 411 aaPredicted RBP6.36□□□□□ -1.39
RIF1-201ENST00000243326 OR13A1Q8NGR1 328 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 PSG1P11464 419 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 GPX4P36969 197 aaPredicted RBP6.35□□□□□ -1.39
RIF1-201ENST00000243326 SERF2P84101 59 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 ZNF324BQ6AW86 544 aaPredicted RBP6.35□□□□□ -1.39
RIF1-201ENST00000243326 PRDM13Q9H4Q3 707 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 SLC25A45Q8N413 288 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 PRDM14Q9GZV8 571 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 FOXD3Q9UJU5 478 aaPredicted RBP6.35□□□□□ -1.39
RIF1-201ENST00000243326 ZNF56Q15929 161 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 SPEM1Q8N4L4 309 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 WNK3Q9BYP7 1800 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 SAA1P0DJI8 122 aaPredicted RBP6.35□□□□□ -1.39
RIF1-201ENST00000243326 IL11RAQ14626 422 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 PRELID3AQ96N28 172 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 IL4P05112 153 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 LRRC75BQ2VPJ9 315 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 SPAG8Q99932 426 aaPredicted RBP6.35□□□□□ -1.39
RIF1-201ENST00000243326 NDUFAF3Q9BU61 184 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 COL5A3P25940 1745 aaPredicted RBP6.35□□□□□ -1.39
RIF1-201ENST00000243326 ISXQ2M1V0 245 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 C19orf67A6NJJ6 358 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 MKRN2OSH3BPM6 223 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 HLA-DQA1P01909 254 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 NUP37Q8NFH4 326 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 SCN4AP35499 1836 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 FAM27BQ5VT28 67 aa6.35□□□□□ -1.39
RIF1-201ENST00000243326 C9orf172C9J069 976 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 PLAURQ03405 335 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 FOXL1Q12952 345 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 WDR82Q6UXN9 313 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 IDI2-AS1Q9NZ38 188 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 A0A1B0GTI1 187 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 PLPPR1Q8TBJ4 325 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 A0A0G2JMZ2 1700 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 LRRC37A2A6NM11 1700 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 LRRC37AA6NMS7 1700 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 TIMP3P35625 211 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 MRPL20Q9BYC9 149 aaKnown RBP6.34□□□□□ -1.39
RIF1-201ENST00000243326 LYNX1G3V0Z9 82 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 LYNX1P0DP58 116 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 TPTE2P1Q5T6R2 138 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 PNKDQ8N490 385 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 OR10J6PQ8NGY7 276 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 ZNF430Q9H8G1 570 aaPredicted RBP6.34□□□□□ -1.39
RIF1-201ENST00000243326 SEMA5BQ9P283 1151 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 PHLDA3Q9Y5J5 127 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 SIPA1L1O43166 1804 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 NKX2-8O15522 239 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 CD3EP07766 207 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 GPR183P32249 361 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 NUDT10Q8NFP7 164 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 KLF14Q8TD94 323 aaPredicted RBP6.34□□□□□ -1.39
RIF1-201ENST00000243326 HEPN1Q6WQI6 88 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 C18orf12Q96KH6 178 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 GTSF1LQ9H1H1 148 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 CD1AP06126 327 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 NPSP0C0P6 89 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 C1orf185Q5T7R7 199 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 IGFL4Q6B9Z1 124 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 OR10W1Q8NGF6 305 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 PPP1R17O96001 155 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 C3orf36Q3SXR2 165 aa6.34□□□□□ -1.39
RIF1-201ENST00000243326 SRSF8Q9BRL6 282 aaKnown RBP6.34□□□□□ -1.39
RIF1-201ENST00000243326 GAS1P54826 345 aa6.34□□□□□ -1.4
RIF1-201ENST00000243326 PRSS57Q6UWY2 283 aa6.34□□□□□ -1.4
RIF1-201ENST00000243326 OCC1Q8TAD7 63 aa6.34□□□□□ -1.4
RIF1-201ENST00000243326 PAPPA2Q9BXP8 1791 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms