RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CD24P25063 80 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 RELBQ01201 579 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 CTDSP1Q9GZU7 261 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 IFI27L2Q9H2X8 130 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 CREBBPQ92793 2442 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 TMEM210A6NLX4 147 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 LYNX1G3V0Z9 82 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 GCGP01275 180 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 OR5G3P0C626 314 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 LYNX1P0DP58 116 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 SSBP2P81877 361 aaPredicted RBP12.4□□□□□ -0.42
EFNB1-201ENST00000204961 EFNB3Q15768 340 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 OR51B2Q9Y5P1 312 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 NOTCH3Q9UM47 2321 aa12.4□□□□□ -0.43
EFNB1-201ENST00000204961 TRAV17A0A0B4J275 112 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 IRF2P14316 349 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 ATP6V1FQ16864 119 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 MORN5Q5VZ52 161 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 DKK4Q9UBT3 224 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 NAGKQ9UJ70 344 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 GOLT1BQ9Y3E0 138 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 TMEM250H0YL14 139 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 TNFSF13O75888 250 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 PYYP10082 97 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 GCHFRP30047 84 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 KRTCAP3Q53RY4 240 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 ETFRF1Q6IPR1 90 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 HSPB9Q9BQS6 159 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 GSX1Q9H4S2 264 aaPredicted RBP12.39□□□□□ -0.43
EFNB1-201ENST00000204961 NAT8BQ9UHF3 227 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 FAM90A26D6RGX4 464 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 NPIPB11E5RHQ5 1161 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 LEMD1Q68G75 181 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 TEPPQ6URK8 271 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 SEM1Q6ZVN7 128 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 SLC35D1Q9NTN3 355 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 S4R3C0 116 aa12.39□□□□□ -0.43
EFNB1-201ENST00000204961 MGST3O14880 152 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 KLK10O43240 276 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 CDKN1AP38936 164 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 CAMPP49913 170 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 STUMQ69YW2 141 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 OR1L6Q8NGR2 347 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 PPP1R35Q8TAP8 253 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 TMEM265A0A087WTH1 108 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 TRGV10A0A0A0MS01 117 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 E7EUB6 86 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 H0Y8G0 127 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 K7EN84 100 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 TUBG2Q9NRH3 451 aa12.38□□□□□ -0.43
EFNB1-201ENST00000204961 PRR33A8MZF0 331 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 TDGF1P3P51864 188 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 LBHQ53QV2 105 aaPredicted RBP12.37□□□□□ -0.43
EFNB1-201ENST00000204961 DBX2Q6ZNG2 339 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 NPVFQ9HCQ7 196 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 CENPEQ02224 2701 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 SERF1AO75920 110 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 ADH4P08319 380 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 ORM2P19652 201 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 Q8N7P7 452 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 HES4Q9HCC6 221 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 TMEM242Q9NWH2 141 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 S100A7P31151 101 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 LOXL3P58215 753 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 CISD2Q8N5K1 135 aaKnown RBP12.37□□□□□ -0.43
EFNB1-201ENST00000204961 NEUROG1Q92886 237 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 DIRC2Q96SL1 478 aa12.37□□□□□ -0.43
EFNB1-201ENST00000204961 MRPL18Q9H0U6 180 aaKnown RBP12.37□□□□□ -0.43
EFNB1-201ENST00000204961 CUBNO60494 3623 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 SRRM5B3KS81 715 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 MOSP00540 346 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 GPR6P46095 362 aaPredicted RBP12.36□□□□□ -0.43
EFNB1-201ENST00000204961 CENPWQ5EE01 88 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 ZBTB34Q8NCN2 500 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 OR4S2Q8NH73 311 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 CMTM2Q8TAZ6 248 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 BTF3L4Q96K17 158 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 NABP2Q9BQ15 211 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 CELSR1Q9NYQ6 3014 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 IGKV1OR2-108A0A075B7D4 117 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 TCF21O43680 179 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 CRISP2P16562 243 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 RANP62826 216 aaKnown RBP12.36□□□□□ -0.43
EFNB1-201ENST00000204961 P0C879 139 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 SELENOVP59797 346 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 GNG5P63218 68 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
EFNB1-201ENST00000204961 HARBI1Q96MB7 349 aa12.36□□□□□ -0.43
EFNB1-201ENST00000204961 HELTA6NFD8 242 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 SFTPCP11686 197 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 OPRK1P41145 380 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 GNG4P50150 75 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 RAB31Q13636 194 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 BEND2Q8NDZ0 799 aa12.35□□□□□ -0.43
EFNB1-201ENST00000204961 SSBP4Q9BWG4 385 aaPredicted RBP12.35□□□□□ -0.43
EFNB1-201ENST00000204961 MRPL20Q9BYC9 149 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms