RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
PAX6-280ENST00000640872 AMTP48728 403 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 ERVK-16P61578 105 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 SPATA45Q537H7 98 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 ABI3Q9P2A4 366 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 ZNF253O75346 499 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 CD59P13987 128 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 GNG4P50150 75 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 MEOX1P50221 254 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 MORN2Q502X0 79 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 LINC00696Q6ZRV3 163 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 PLPPR2Q96GM1 343 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 SLC35E1Q96K37 410 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 SPRY4Q9C004 299 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 SLC25A10Q9UBX3 287 aaPredicted RBP11.28□□□□□ -0.6
PAX6-280ENST00000640872 CNOT1A5YKK6 2376 aaKnown RBP11.27□□□□□ -0.6
PAX6-280ENST00000640872 YLPM1P49750 1951 aaKnown RBP11.27□□□□□ -0.6
PAX6-280ENST00000640872 PCNX2A6NKB5 2137 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 IGHV1-2P23083 117 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 CHRNB4P30926 498 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 ZNF83P51522 516 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.6
PAX6-280ENST00000640872 MMDQ15546 238 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 SMIM21Q3B7S5 101 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 COX19Q49B96 90 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 MIR17HGQ75NE6 70 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 CD177Q8N6Q3 437 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 OSTCQ9NRP0 149 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 UQCR10Q9UDW1 63 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 JPT1Q9UK76 154 aa11.27□□□□□ -0.6
PAX6-280ENST00000640872 HELTA6NFD8 242 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 SIAH2O43255 324 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 SPINK4O60575 86 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 OR5G3P0C626 314 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 LINC00869P0C866 280 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 IGLC2P0DOY2 106 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 IGLC3P0DOY3 106 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 RPL19P84098 196 aaKnown RBP11.27□□□□□ -0.61
PAX6-280ENST00000640872 KIAA1644Q3SXP7 199 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 DOLPP1Q86YN1 238 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 C11orf42Q8N5U0 333 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 FAM216AQ8WUB2 273 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 STARD4Q96DR4 205 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
PAX6-280ENST00000640872 GNG12Q9UBI6 72 aa11.27□□□□□ -0.61
PAX6-280ENST00000640872 C15orf61A6NNL5 157 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 BMPR1BO00238 502 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 HYPMO75409 117 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 ZNF324O75467 553 aaPredicted RBP11.26□□□□□ -0.61
PAX6-280ENST00000640872 NDUFB8O95169 186 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 REG1AP05451 166 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 IGFBP2P18065 325 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 PMCHP20382 165 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 NPY1RP25929 384 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 CRYBB3P26998 211 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 RAB31Q13636 194 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 EDDM3AQ14507 147 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 NIT1Q86X76 327 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 GCNT2Q8N0V5 402 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 SLC24A4Q8NFF2 622 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 DDB2Q92466 427 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 S1PR3Q99500 378 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 IFI27L2Q9H2X8 130 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 DNAJC4Q9NNZ3 241 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 IL19Q9UHD0 177 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 STPG4Q8N801 248 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 NEUROG1Q92886 237 aa11.26□□□□□ -0.61
PAX6-280ENST00000640872 AHRRA9YTQ3 701 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 AMY1AP04745 511 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 C3orf79P0CE67 100 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 ZNF134P52741 427 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 PRRX1P54821 245 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 FXYD3Q14802 87 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 PSG5Q15238 335 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 TMEM167BQ9NRX6 74 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 SPRR3Q9UBC9 169 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 PPIAL4AQ9Y536 164 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 ISLRO14498 428 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 LYZL6O75951 148 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 ACTL6BO94805 426 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 CA2P00918 260 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 IGLV2-8P01709 118 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 ZNF883P0CG24 379 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 SRIP30626 198 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 LOXL3P58215 753 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 SLC35B1P78383 322 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 DHRS13Q6UX07 377 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 C1orf229Q6ZS94 237 aaPredicted RBP11.25□□□□□ -0.61
PAX6-280ENST00000640872 ZPBPQ9BS86 351 aa11.25□□□□□ -0.61
PAX6-280ENST00000640872 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
PAX6-280ENST00000640872 KLF13Q9Y2Y9 288 aaPredicted RBP11.25□□□□□ -0.61
PAX6-280ENST00000640872 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
PAX6-280ENST00000640872 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms