RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 BAGE2Q86Y30 109 aa12.02□□□□□ -0.48
SCARB2-221ENST00000640341 IGKV1-16P04430 117 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 LOXL3P58215 753 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 SSTP61278 116 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 RAB31Q13636 194 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 IQCJQ1A5X6 159 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 GBGT1Q8N5D6 347 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 STARD4Q96DR4 205 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 PLEKHA3Q9HB20 300 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 ELOVL5Q9NYP7 299 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 SH3BGRL2Q9UJC5 107 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 TACC2O95359 2948 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 PRR33A8MZF0 331 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 EREGO14944 169 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 MMP23AO75900 390 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 KLF3P57682 345 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-221ENST00000640341 BATFQ16520 125 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 ZNF705AQ6ZN79 300 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-221ENST00000640341 TCTEX1D1Q8N7M0 179 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 SAMD10Q9BYL1 202 aa12.02□□□□□ -0.49
SCARB2-221ENST00000640341 ZNF71Q9NQZ8 489 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-221ENST00000640341 OR8I2Q8N0Y5 310 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 CMTM2Q8TAZ6 248 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 TRAV17A0A0B4J275 112 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 K7EN84 100 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 GCGP01275 180 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 RHOBP62745 196 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 CCL8P80075 99 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 UHRF2Q96PU4 802 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 TBX15Q96SF7 602 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 RNASE7Q9H1E1 156 aaKnown RBP12.01□□□□□ -0.49
SCARB2-221ENST00000640341 OR51B2Q9Y5P1 312 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 SNURFLB1AK76 121 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 F2Z2F3 143 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 J3QR06 171 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 TNFSF13O75888 250 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 PQLC2Q6ZP29 291 aa12.01□□□□□ -0.49
SCARB2-221ENST00000640341 TMPRSS2O15393 492 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 YPEL1O60688 119 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 MPDU1O75352 247 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 LCN2P80188 198 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 OR10W1Q8NGF6 305 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
SCARB2-221ENST00000640341 YPEL2Q96QA6 119 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 CEP295Q9C0D2 2601 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 DSCAMO60469 2012 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 TRGV10A0A0A0MS01 117 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 CRISP2P16562 243 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
SCARB2-221ENST00000640341 CYB5R2Q6BCY4 276 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 OR1L6Q8NGR2 347 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
SCARB2-221ENST00000640341 PAM16Q9Y3D7 125 aa12□□□□□ -0.49
SCARB2-221ENST00000640341 HSPE1P61604 102 aaKnown RBP11.99□□□□□ -0.49
SCARB2-221ENST00000640341 SUMO1P63165 101 aaKnown RBP11.99□□□□□ -0.49
SCARB2-221ENST00000640341 TDRG1Q3Y452 100 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 TRAT1Q6PIZ9 186 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 LHFPL4Q7Z7J7 247 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 C1orf159Q96HA4 380 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 NAV3Q8IVL0 2385 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 C15orf61A6NNL5 157 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 IGHG3P01860 377 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 KRTCAP3Q53RY4 240 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 NDUFAF3Q9BU61 184 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 DKK4Q9UBT3 224 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 A8MXE2 369 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 SERF1AO75920 110 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 CA1P00915 261 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-221ENST00000640341 APELAP0DMC3 54 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 OR10J1P30954 320 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 COA6Q5JTJ3 125 aaKnown RBP11.99□□□□□ -0.49
SCARB2-221ENST00000640341 PLA2G2CQ5R387 149 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 MRPL54Q6P161 138 aaKnown RBP11.99□□□□□ -0.49
SCARB2-221ENST00000640341 FAM90A1Q86YD7 464 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 HSPB9Q9BQS6 159 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 NAGKQ9UJ70 344 aa11.99□□□□□ -0.49
SCARB2-221ENST00000640341 TYMSP04818 313 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 GNG4P50150 75 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 MZT1Q08AG7 82 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 FAM27E3Q08E93 113 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 OR9G1Q8NH87 305 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 VN1R17PQ8TDU5 208 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 RAB1CQ92928 201 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 DIRC2Q96SL1 478 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 COL27A1Q8IZC6 1860 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-221ENST00000640341 TNFAIP6P98066 277 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-221ENST00000640341 C17orf58Q2M2W7 97 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 CENPWQ5EE01 88 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 MBNL2Q5VZF2 373 aaKnown RBP11.98□□□□□ -0.49
SCARB2-221ENST00000640341 SGK494Q96LW2 274 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 NABP2Q9BQ15 211 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 PLSCR4Q9NRQ2 329 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 NAT8BQ9UHF3 227 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 SLC25A15Q9Y619 301 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 MT-CO2P00403 227 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 CCKARP32238 428 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 TMEM144Q7Z5S9 345 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 MMD2Q8IY49 270 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 SLC35D1Q9NTN3 355 aa11.98□□□□□ -0.49
SCARB2-221ENST00000640341 IDI2-AS1Q9NZ38 188 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms