RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 FCN1O00602 326 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM241Q24JQ0 296 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 PLAC9Q5JTB6 97 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TCF24Q7RTU0 167 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM219Q86XT9 240 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM131Q92545 1883 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 IQCF6A8MYZ5 107 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 NBR2O15453 112 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 CELA3BP08861 270 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 SCTP09683 121 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 FCGR2BP31994 310 aaPredicted RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 HRH1P35367 487 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 RXFP4Q8TDU9 374 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 SLC35B3Q9H1N7 401 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 PHLDA3Q9Y5J5 127 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 A0A087WX48 190 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 TRBV9A0A0B4J1U6 114 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 GAGE10A6NGK3 116 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 OR4C45A6NMZ5 311 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 E7EQL1 145 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 TRGC2P03986 189 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CD37P11049 281 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 HIST1H1DP16402 221 aaKnown RBP4.23□□□□□ -1.73
SCN1A-218ENST00000640036 OR10J1P30954 320 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 RNASEKQ6P5S7 137 aaKnown RBP4.23□□□□□ -1.73
SCN1A-218ENST00000640036 MAVSQ7Z434 540 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 DRAM1Q8N682 238 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 SLC25A38Q96DW6 304 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 SLX1AQ9BQ83 275 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 GSX2Q9BZM3 304 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CSAG2Q9Y5P2 127 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 ASPDHA6ND91 283 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CTSBP07858 339 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 IL6RP08887 468 aaPredicted RBP4.23□□□□□ -1.73
SCN1A-218ENST00000640036 MMP16P51512 607 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM136Q6ZRR5 245 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 ZAR1Q86SH2 424 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 DYRK2Q92630 601 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 FBXL15Q9H469 300 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 OR2W1Q9Y3N9 320 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 DCTDP32321 178 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 SNRPEP62304 92 aaKnown RBP4.23□□□□□ -1.73
SCN1A-218ENST00000640036 HIST1H1AQ02539 215 aaPredicted RBP4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CLEC19AQ6UXS0 136 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CLDND2Q8NHS1 167 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 RNF133Q8WVZ7 376 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 RBKSQ9H477 322 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 IFT22Q9H7X7 185 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 DEPPQ9NTK1 212 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CGB1A6NKQ9 187 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 GDNFP39905 211 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 ASPHD2Q6ICH7 369 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CELF2-AS1Q8N7Q2 184 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 DNAJC30Q96LL9 226 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 SLC25A15Q9Y619 301 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 TRAV41A0A0B4J266 112 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CCSO14618 274 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 CEACAM4O75871 244 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 GPR183P32249 361 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 IGLV3-21P80748 117 aaPredicted RBP4.23□□□□□ -1.73
SCN1A-218ENST00000640036 PRSS57Q6UWY2 283 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 SAXO1Q8IYX7 474 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 RMI2Q96E14 147 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 ZNF488Q96MN9 340 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 WNT5BQ9H1J7 359 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 GALP22466 123 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 RPL12P30050 165 aaKnown RBP4.23□□□□□ -1.73
SCN1A-218ENST00000640036 C10orf113Q5VZT2 155 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM86BQ8N661 226 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 FAM216BQ8N7L0 139 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 ZDHHC22Q8N966 263 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 PGLYRP3Q96LB9 341 aa4.23□□□□□ -1.73
SCN1A-218ENST00000640036 TGIF2-C20orf24A0A0A6YYL0 155 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 C7orf66A4D0T2 115 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 NPIPB13A6NJU9 1138 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 IFITM5A6NNB3 132 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 NPIPB4C9JG80 1138 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 UBE2L3P68036 154 aaKnown RBP4.22□□□□□ -1.73
SCN1A-218ENST00000640036 PRSS53Q2L4Q9 553 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 MESTQ5EB52 335 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 USMG5Q96IX5 58 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 PAXXQ9BUH6 204 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 C21orf62Q9NYP8 219 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 IGHV3-35A0A0C4DH35 117 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 A8MWL6 223 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM178BH3BS89 294 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 IGHV1-46P01743 117 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 LURAP1LQ8IV03 231 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 SPNS2Q8IVW8 549 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 LRTM2Q8N967 370 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 OR13C6PQ8NH95 151 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 ABHD14BQ96IU4 210 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 C19orf24Q9BVV8 132 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 CHST2Q9Y4C5 530 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 IGHV1-69DA0A0B4J2H0 117 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 IGKV3OR2-268A0A0C4DH90 116 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 TCRBV3S1A0A5B6 114 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 H3BP45 60 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 IGHV1-69P01742 117 aa4.22□□□□□ -1.73
SCN1A-218ENST00000640036 PRTN3P24158 256 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms