RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ETDBQ3ZM63 59 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 ZNF766Q5HY98 468 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 SPATA46Q5T0L3 261 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 SAMD5Q5TGI4 173 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 ZFAND6Q6FIF0 208 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM136Q6ZRR5 245 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 SCCPDHQ8NBX0 429 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 MRGPRFQ96AM1 343 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 S1PR3Q99500 378 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM147Q9BVK8 224 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 VSIRQ9H7M9 311 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 NGBQ9NPG2 151 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 IL36BQ9NZH7 164 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 DENND4CQ5VZ89 1909 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 SNRNP200O75643 2136 aaKnown RBP4.79□□□□□ -1.64
SCARB2-218ENST00000639715 LOC102723996A0A087X1L8 192 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 A0A1W2PS18 150 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 LRRC30A6NM36 301 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 CELA2AP08217 269 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 MFAP2P55001 183 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 PRSS12P56730 875 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 MRPL14Q6P1L8 145 aaKnown RBP4.79□□□□□ -1.64
SCARB2-218ENST00000639715 C1QL2Q7Z5L3 287 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM171Q8WVE6 324 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 IMMP1LQ96LU5 166 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 OR2V2Q96R30 315 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 PMCHL2Q9BQD1 86 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 C19orf24Q9BVV8 132 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 VCX2Q9H322 139 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 SAP30LQ9HAJ7 183 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 SDK2Q58EX2 2172 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 NUP210Q8TEM1 1887 aaPredicted RBP4.79□□□□□ -1.64
SCARB2-218ENST00000639715 SPAARA0A1B0GVQ0 90 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 A1L4Q6 167 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 F2Z2F3 143 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 CSN3P07498 182 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 CCL2P13500 99 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 TAS2R45P59539 299 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 Q0VG73 95 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 IL15RAQ13261 267 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 C5orf64Q2M2E5 130 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 BHLHA15Q7RTS1 189 aaPredicted RBP4.79□□□□□ -1.64
SCARB2-218ENST00000639715 SHISA5Q8N114 240 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 FAM169BQ8N8A8 192 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 MBD3L1Q8WWY6 194 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 ADTRPQ96IZ2 230 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 MS4A5Q9H3V2 200 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 C19orf67A6NJJ6 358 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 ZIC3O60481 467 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 NMUP48645 174 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 LHX2P50458 406 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 KIR3DS1Q14943 382 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 RTL8BQ17RB0 113 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 TIMM23BQ5SRD1 257 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 GATAD1Q8WUU5 269 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 TPPP3Q9BW30 176 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 NPFFR1Q9GZQ6 430 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 F11RQ9Y624 299 aaKnown RBP4.79□□□□□ -1.64
SCARB2-218ENST00000639715 MPDZO75970 2070 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 OOEPA6NGQ2 149 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 SYNGR3O43761 229 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 NAPSAO96009 420 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 HBZP02008 142 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 ZNF816Q0VGE8 651 aaPredicted RBP4.79□□□□□ -1.64
SCARB2-218ENST00000639715 LHFPL1Q86WI0 220 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 TAF15Q92804 592 aaKnown RBP eCLIP4.79□□□□□ -1.64
SCARB2-218ENST00000639715 RNF183Q96D59 192 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 CXXC4Q9H2H0 198 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 FSCN3Q9NQT6 498 aa4.79□□□□□ -1.64
SCARB2-218ENST00000639715 RTTNQ86VV8 2226 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 IGKV1-9A0A0C4DH69 117 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 PSMB11A5LHX3 300 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 ENSAO43768 121 aaKnown RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 KLF7O75840 302 aaPredicted RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 MAGEA5P43359 124 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 SUB1P53999 127 aaKnown RBP eCLIP4.78□□□□□ -1.643e-7■■■□□ 19
SCARB2-218ENST00000639715 RPL15P61313 204 aaKnown RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 CFHR1Q03591 330 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 OR10J3Q5JRS4 329 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 INO80CQ6PI98 192 aaPredicted RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 ZNF562Q6V9R5 426 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 SIGLEC12Q96PQ1 595 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 AGMATQ9BSE5 352 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 SRXN1Q9BYN0 137 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 hCG_38984A0A1B0GV85 526 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 FAM90A26D6RGX4 464 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 CHEK1O14757 476 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 CT45A6P0DMU7 189 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 CT45A5P0DMU8 189 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 CT45A7P0DMV0 189 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 GATA2P23769 480 aaPredicted RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 KIR2DS2P43631 304 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 CT45A1Q5HYN5 189 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 CT45A3Q8NHU0 189 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 PIMREGQ9BSJ6 248 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM140Q9NV12 185 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 SOX21Q9Y651 276 aaPredicted RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 IGHV3-64DA0A0J9YX35 117 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 FAM181BA6NEQ2 426 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms