RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 NAPSAO96009 420 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 TRACP01848 142 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 SSR2P43308 183 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF85Q03923 595 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 Q56UQ5 140 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 GCSAMQ8N6F7 178 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 TPRX1Q8N7U7 411 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 MRPL30Q8TCC3 161 aaKnown RBP3.63□□□□□ -1.83
SCN3A-209ENST00000639244 CT55Q8WUE5 264 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 CACNG5Q9UF02 275 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 FAM240AA0A1B0GVK7 77 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 DUSP14O95147 198 aaKnown RBP3.63□□□□□ -1.83
SCN3A-209ENST00000639244 PFN3P60673 137 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 MST1LQ2TV78 715 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF542PQ5EBM4 170 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 PLPP4Q5VZY2 271 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 Q6ZS92 163 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 TMEM86BQ8N661 226 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 C9orf85Q96MD7 179 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 COMMD5Q9GZQ3 224 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-209ENST00000639244 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-209ENST00000639244 GPR137BO60478 399 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 NDUFB4O95168 129 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 GPX3P22352 226 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 C1orf61Q13536 156 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 Q499Y3 187 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 LSM10Q969L4 123 aaKnown RBP3.63□□□□□ -1.83
SCN3A-209ENST00000639244 RTBDNQ9BSG5 229 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-209ENST00000639244 WNT10AQ9GZT5 417 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 AP5S1Q9NUS5 200 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 COL24A1Q17RW2 1714 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 RREB1Q92766 1687 aa3.63□□□□□ -1.83
SCN3A-209ENST00000639244 M0QYG6 137 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 YPEL1O60688 119 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 C9orf57Q5W0N0 161 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 OR2AJ1Q8NGZ0 328 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 RNF128Q8TEB7 428 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 YPEL2Q96QA6 119 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TECRQ9NZ01 308 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 MTFP1Q9UDX5 166 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 LSM2Q9Y333 95 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TRAV9-1A0A075B6T8 112 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TEX50A0A1B0GTY4 177 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF324O75467 553 aaPredicted RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 PPP1CCP36873 323 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 EMDP50402 254 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 P2RX1P51575 399 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 ENTPD8Q5MY95 495 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 LCN12Q6JVE5 192 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 OR4F17Q8NGA8 305 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 OR4F4Q96R69 305 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 MANBALQ9NQG1 85 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 C1RLQ9NZP8 487 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 PAPPAQ13219 1627 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 FAM90A10PA6NDY2 464 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 ZFAND5O76080 213 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 OPRK1P41145 380 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 SGMS2Q8NHU3 365 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 ARL2-SNX15V9GYD0 113 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TRAV8-1A0A0A6YYK1 113 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 ACVRL1P37023 503 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 RPS4XP62701 263 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 ANXA2RQ3ZCQ2 193 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 IL17DQ8TAD2 202 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 OSR1Q8TAX0 266 aaPredicted RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 SIRT4Q9Y6E7 314 aaPredicted RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 H7C1H1 209 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 PFN1P07737 140 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 PCBP3P57721 371 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TAF10Q12962 218 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 PSMG4Q5JS54 123 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TMEM255BQ8WV15 326 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 PBOV1Q9GZY1 135 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TMEM222Q9H0R3 208 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 DNAJB12Q9NXW2 375 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 SLAMF8Q9P0V8 285 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 MRPS17Q9Y2R5 130 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TJP1Q07157 1748 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 CEP192Q8TEP8 1941 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 TMEM272A0A1B0GTI8 110 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 SLC17A2O00624 439 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 AMY2AP04746 511 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 BCL2P10415 239 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 FOXI1Q12951 378 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 RNASE7Q9H1E1 156 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 FCN1O00602 326 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 CXCL13O43927 109 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 LMO1P25800 156 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 SGSHP51688 502 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 RPL15P61313 204 aaKnown RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 DCAF12Q5T6F0 453 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 DMKNQ6E0U4 476 aaPredicted RBP3.62□□□□□ -1.83
SCN3A-209ENST00000639244 DEFB119Q8N690 84 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 BORCS8Q96FH0 119 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 LINC00312Q9Y6C7 94 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 RICTORQ6R327 1708 aa3.62□□□□□ -1.83
SCN3A-209ENST00000639244 CSRP1P21291 193 aaKnown RBP3.61□□□□□ -1.83
SCN3A-209ENST00000639244 GRNP28799 593 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms