RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 HIST1H2BKO60814 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST1H2BJP06899 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST1H2BOP23527 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST1H2BBP33778 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST1H2BDP58876 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST1H2BCP62807 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST2H2BEQ16778 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-213ENST00000638680 MTURNQ8N3F0 131 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST1H2BHQ93079 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 GFI1Q99684 422 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST1H2BNQ99877 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 HIST1H2BMQ99879 126 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 RNASE7Q9H1E1 156 aaKnown RBP15.59■□□□□ 0.09
SCARB2-213ENST00000638680 ANKRD36A6QL64 1941 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 SPTBP11277 2137 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 TSPAN13O95857 204 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 PPP1R17O96001 155 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 FTH1P19P0C7X4 201 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 KLRB1Q12918 225 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 LY6EQ16553 131 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 COPS9Q8WXC6 57 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 ALKBH7Q9BT30 221 aaPredicted RBP15.58■□□□□ 0.09
SCARB2-213ENST00000638680 IGHV3-66A0A0C4DH42 116 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 CLEC2AQ6UVW9 174 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 OR52E5Q8NH55 327 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 FAM131CQ96AQ9 280 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 GEMIN7Q9H840 131 aaKnown RBP15.58■□□□□ 0.09
SCARB2-213ENST00000638680 LAMTOR2Q9Y2Q5 125 aa15.58■□□□□ 0.09
SCARB2-213ENST00000638680 C9orf172C9J069 976 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 Q6ZT83 130 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 OSR1Q8TAX0 266 aaPredicted RBP15.58■□□□□ 0.08
SCARB2-213ENST00000638680 WFDC1Q9HC57 220 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 SPCS1Q9Y6A9 102 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 IGKV1D-13A0A0B4J2D9 117 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 A0A1B0GWB2 263 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 EPOPA6NHQ4 379 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 IGKV1-13P0DP09 117 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 FAM201AQ5SY85 155 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 PPP1R32Q7Z5V6 425 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 PRDM13Q9H4Q3 707 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 A0A1W2PR77 199 aa15.58■□□□□ 0.08
SCARB2-213ENST00000638680 DNASE2BQ8WZ79 361 aa15.57■□□□□ 0.08
SCARB2-213ENST00000638680 CFHR5Q9BXR6 569 aa15.57■□□□□ 0.08
SCARB2-213ENST00000638680 HIGD1CA8MV81 97 aa15.57■□□□□ 0.08
SCARB2-213ENST00000638680 FAM159AQ6UWV7 190 aa15.57■□□□□ 0.08
SCARB2-213ENST00000638680 ZNF703Q9H7S9 590 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-213ENST00000638680 FOXA2Q9Y261 457 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-213ENST00000638680 MOB4Q9Y3A3 225 aa15.57■□□□□ 0.08
SCARB2-213ENST00000638680 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
SCARB2-213ENST00000638680 CCL20P78556 96 aa15.57■□□□□ 0.08
SCARB2-213ENST00000638680 SIGLEC12Q96PQ1 595 aa15.57■□□□□ 0.08
SCARB2-213ENST00000638680 RP1L1Q8IWN7 2480 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-213ENST00000638680 A0A1B0GV72 72 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 ATXN7O15265 892 aaPredicted RBP15.56■□□□□ 0.08
SCARB2-213ENST00000638680 SOX21Q9Y651 276 aaPredicted RBP15.56■□□□□ 0.08
SCARB2-213ENST00000638680 M0R381 172 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 LYPD3O95274 346 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.56■□□□□ 0.08
SCARB2-213ENST00000638680 NEUROG1Q92886 237 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 IGKV3-20P01619 116 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 PLPPR1Q8TBJ4 325 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 RAX2Q96IS3 184 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 IGKV3OR2-268A0A0C4DH90 116 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 LYZL4Q96KX0 146 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 REPIN1Q9BWE0 567 aaKnown RBP15.56■□□□□ 0.08
SCARB2-213ENST00000638680 FBXL15Q9H469 300 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 RNF115Q9Y4L5 304 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 POLR2AP24928 1970 aaKnown RBP15.56■□□□□ 0.08
SCARB2-213ENST00000638680 THSD7AQ9UPZ6 1657 aa15.56■□□□□ 0.08
SCARB2-213ENST00000638680 SSBP4Q9BWG4 385 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-213ENST00000638680 TRBV6-7A0A0A0MS04 114 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 IGHV3-49A0A0A0MS15 119 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 A0A0G2JMM0 328 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 A0A1W2PPB8 328 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 A0A1W2PRS3 328 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 KIR3DP1A8MWS1 328 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 STPG1Q5TH74 334 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 CD55P08174 381 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 MEF2CQ06413 473 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-213ENST00000638680 SCGB3A1Q96QR1 104 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 Q9H3A6 140 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 C9JCJ5 164 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 CECR9P0C854 216 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 TSPOP30536 169 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 HEPN1Q6WQI6 88 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 FAM216BQ8N7L0 139 aa15.55■□□□□ 0.08
SCARB2-213ENST00000638680 A0A0A6YYD4 124 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 IGKV1-9A0A0C4DH69 117 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 DUX5Q96PT3 197 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 FOXD3Q9UJU5 478 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-213ENST00000638680 ATP5LO75964 103 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 GPR183P32249 361 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 GNG5P63218 68 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 GLRX5Q86SX6 157 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 FADS6Q8N9I5 356 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 FGF11Q92914 225 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 SCN2AQ99250 2005 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 KBTBD11-OT1A0A1B0GTJ5 212 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 STARD6P59095 220 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms