RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TMEM186Q96B77 213 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 FLYWCH2Q96CP2 140 aaKnown RBP17.49■□□□□ 0.39
CLN6-224ENST00000638076 NAT8Q9UHE5 227 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 IGF2RP11717 2491 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 RPS10P46783 165 aaKnown RBP17.49■□□□□ 0.39
CLN6-224ENST00000638076 B2MP61769 119 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 LINC00518Q8N0U6 118 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 C8orf31Q8N9H6 132 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 OR5B3Q8NH48 314 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 PARLQ9H300 379 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 TMEM177Q53S58 311 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 CYP2G1PQ6ZSU1 146 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 NABP2Q9BQ15 211 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 TGIF2-C20orf24A0A0A6YYL0 155 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 IGHV1-8P0DP01 117 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 COL8A2P25067 703 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 CDSNQ15517 529 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 TMEM241Q24JQ0 296 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 TMEM249Q2WGJ8 235 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 FAM71F2Q6NXP2 309 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 KCNIP2Q9NS61 270 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 TMEM242Q9NWH2 141 aa17.48■□□□□ 0.39
CLN6-224ENST00000638076 C11orf94C9JXX5 98 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 ADIRFQ15847 76 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 C1QL4Q86Z23 238 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 ST6GALNAC6Q969X2 333 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 A0A087X0M5 115 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 A0A1B0GX30 115 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 C5orf52A6NGY3 159 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 UBE2G2P60604 165 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 ADORA2A-AS1P86434 159 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 STPG3Q8N7X2 389 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 OR4C13Q8NGP0 309 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 OR9G1Q8NH87 305 aa17.47■□□□□ 0.39
CLN6-224ENST00000638076 NEIL1Q96FI4 390 aaPredicted RBP17.47■□□□□ 0.39
CLN6-224ENST00000638076 SPTA1P02549 2419 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 TNCP24821 2201 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 CLDN34H7C241 214 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 NDUFS6O75380 124 aaKnown RBP17.46■□□□□ 0.39
CLN6-224ENST00000638076 RAB31Q13636 194 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 PDPNQ86YL7 162 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 C11orf42Q8N5U0 333 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 OR10W1Q8NGF6 305 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 FAM122AQ96E09 287 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 COMMD5Q9GZQ3 224 aa17.46■□□□□ 0.39
CLN6-224ENST00000638076 STAG3L2P0CL84 134 aa17.46■□□□□ 0.38
CLN6-224ENST00000638076 STAG3L3P0CL85 134 aa17.46■□□□□ 0.38
CLN6-224ENST00000638076 ARL14EPLP0DKL9 152 aa17.46■□□□□ 0.38
CLN6-224ENST00000638076 IGFBP2P18065 325 aa17.46■□□□□ 0.38
CLN6-224ENST00000638076 RPL8P62917 257 aaKnown RBP17.46■□□□□ 0.38
CLN6-224ENST00000638076 ZNF672Q499Z4 452 aaPredicted RBP17.46■□□□□ 0.38
CLN6-224ENST00000638076 ABHD5Q8WTS1 349 aa17.46■□□□□ 0.38
CLN6-224ENST00000638076 ZZEF1O43149 2961 aa17.45■□□□□ 0.38
CLN6-224ENST00000638076 FNDC10F2Z333 226 aa17.45■□□□□ 0.38
CLN6-224ENST00000638076 C2orf83Q53S99 150 aa17.45■□□□□ 0.38
CLN6-224ENST00000638076 MOB3BQ86TA1 216 aa17.45■□□□□ 0.38
CLN6-224ENST00000638076 NDUFA4L2Q9NRX3 87 aa17.45■□□□□ 0.38
CLN6-224ENST00000638076 RPL29P47914 159 aaKnown RBP17.44■□□□□ 0.38
CLN6-224ENST00000638076 ZNF137PP52743 207 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 RPL23P62829 140 aaKnown RBP17.44■□□□□ 0.38
CLN6-224ENST00000638076 CST9LP1Q5W188 147 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 SPNS3Q6ZMD2 512 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 TGIF2LXQ8IUE1 241 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 SSX3Q99909 188 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 RALYQ9UKM9 306 aaKnown RBP17.44■□□□□ 0.38
CLN6-224ENST00000638076 TRBV23-1A0A0A0MS06 115 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 RND2P52198 227 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 BSXQ3C1V8 233 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 TMEM133Q9H2Q1 129 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 WASHC3Q9Y3C0 194 aa17.44■□□□□ 0.38
CLN6-224ENST00000638076 CXorf1O96002 111 aa17.43■□□□□ 0.38
CLN6-224ENST00000638076 RNASE2P10153 161 aaKnown RBP17.43■□□□□ 0.38
CLN6-224ENST00000638076 USF1P22415 310 aaPredicted RBP17.43■□□□□ 0.38
CLN6-224ENST00000638076 ATP5G3P48201 142 aa17.43■□□□□ 0.38
CLN6-224ENST00000638076 OR1L8Q8NGR8 309 aa17.43■□□□□ 0.38
CLN6-224ENST00000638076 CTDSP1Q9GZU7 261 aa17.43■□□□□ 0.38
CLN6-224ENST00000638076 SEPSECSQ9HD40 501 aaKnown RBP17.43■□□□□ 0.38
CLN6-224ENST00000638076 E7EUB6 86 aa17.43■□□□□ 0.38
CLN6-224ENST00000638076 NPPCP23582 126 aa17.43■□□□□ 0.38
CLN6-224ENST00000638076 ATP5IP56385 69 aaPredicted RBP17.43■□□□□ 0.38
CLN6-224ENST00000638076 OR51G1Q8NGK1 321 aa17.43■□□□□ 0.38
CLN6-224ENST00000638076 VSTM2AQ8TAG5 236 aa17.43■□□□□ 0.38
CLN6-224ENST00000638076 UBE2CO00762 179 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 PRR20EP86478 221 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 PRR20CP86479 221 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 PRR20DP86480 221 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 PRR20BP86481 221 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 PRR20AP86496 221 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 TMEM144Q7Z5S9 345 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 TMEM167AQ8TBQ9 72 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 PCGF1Q9BSM1 259 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 PDE6DO43924 150 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 IGLV2-23P01705 113 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 DLX1P56177 255 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 SPATA31B1PQ5VZV4 182 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 ZNF841Q6ZN19 808 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 OR4A5Q8NH83 315 aa17.42■□□□□ 0.38
CLN6-224ENST00000638076 IGHV2-70P01814 119 aa17.41■□□□□ 0.38
CLN6-224ENST00000638076 IGHV2-5P01817 119 aa17.41■□□□□ 0.38
CLN6-224ENST00000638076 RHOBP62745 196 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms