RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 YPEL1O60688 119 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 DEDDO75618 318 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 MOSP00540 346 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 CFDP00746 253 aaPredicted RBP6.11□□□□□ -1.43
PNKP-229ENST00000637897 SERPINE2P07093 398 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 PF4V1P10720 104 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 EGR2P11161 476 aaPredicted RBP6.11□□□□□ -1.43
PNKP-229ENST00000637897 VDAC1P21796 283 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 PSMB8P28062 276 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 CEACAM6P40199 344 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 S100A10P60903 97 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 EIF5AP63241 154 aaKnown RBP6.11□□□□□ -1.43
PNKP-229ENST00000637897 HTD2P86397 168 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 THOC7Q6I9Y2 204 aaKnown RBP6.11□□□□□ -1.43
PNKP-229ENST00000637897 ZNF833PQ6ZTB9 187 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 LYZL2Q7Z4W2 148 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 SELENOHQ8IZQ5 122 aaKnown RBP6.11□□□□□ -1.43
PNKP-229ENST00000637897 SLC35G3Q8N808 338 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 OR2T10Q8NGZ9 312 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 OR1S1Q8NH92 325 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 ST8SIA2Q92186 375 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 RBPMSQ93062 196 aaKnown RBP6.11□□□□□ -1.43
PNKP-229ENST00000637897 C5orf30Q96GV9 206 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 YPEL2Q96QA6 119 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 ZNF471Q9BX82 626 aaPredicted RBP6.11□□□□□ -1.43
PNKP-229ENST00000637897 LIN7CQ9NUP9 197 aaKnown RBP6.11□□□□□ -1.43
PNKP-229ENST00000637897 NSG2Q9Y328 171 aa6.11□□□□□ -1.43
PNKP-229ENST00000637897 SAA2-SAA4A0A096LPE2 208 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 IGHV7-81A0A0B4J1V7 117 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 RPS10-NUDT3A0A1W2PQS6 291 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 NCBP2LA6PVI3 153 aaKnown RBP6.1□□□□□ -1.43
PNKP-229ENST00000637897 K7EPK0 472 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 FCN1O00602 326 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 ST8SIA5O15466 376 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 ST8SIA3O43173 380 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 SPDEFO95238 335 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 IGHG4P01861 327 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 MBPP02686 304 aaPredicted RBP6.1□□□□□ -1.43
PNKP-229ENST00000637897 IGF1P05019 195 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 OR8U9P0C7N5 309 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 SAA2P0DJI9 122 aaPredicted RBP6.1□□□□□ -1.43
PNKP-229ENST00000637897 CT45A6P0DMU7 189 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 CT45A5P0DMU8 189 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 CT45A7P0DMV0 189 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 SLC25A6P12236 298 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 TPT1P13693 172 aaKnown RBP6.1□□□□□ -1.43
PNKP-229ENST00000637897 ARHGDIBP52566 201 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 SSBP2P81877 361 aaPredicted RBP6.1□□□□□ -1.43
PNKP-229ENST00000637897 FHL3Q13643 280 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 TMEM30BQ3MIR4 351 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 RPL39P5Q59GN2 51 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 KHDC1LQ5JSQ8 128 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 ALKAL2Q6UX46 152 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 REC114Q7Z4M0 266 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 ZNF645Q8N7E2 425 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 TCTEX1D1Q8N7M0 179 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 KLHL30-AS1Q8NEE0 82 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 OR8U1Q8NH10 309 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 LHFPL5Q8TAF8 219 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 STOML3Q8TAV4 291 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 LRRC20Q8TCA0 184 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 RRNAD1Q96FB5 475 aaKnown RBP6.1□□□□□ -1.43
PNKP-229ENST00000637897 RCC1LQ96I51 464 aaKnown RBP6.1□□□□□ -1.43
PNKP-229ENST00000637897 ABHD14AQ9BUJ0 271 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 SLC25A32Q9H2D1 315 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 GNB4Q9HAV0 340 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 OR2S2Q9NQN1 319 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 ZC4H2Q9NQZ6 224 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 TPSG1Q9NRR2 321 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 FAM212BQ9NTI7 297 aaPredicted RBP6.1□□□□□ -1.43
PNKP-229ENST00000637897 MED9Q9NWA0 146 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 OR5AC2Q9NZP5 309 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 GNG12Q9UBI6 72 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 JPT1Q9UK76 154 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 TNCP24821 2201 aa6.1□□□□□ -1.43
PNKP-229ENST00000637897 A0A1B0GU03 582 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 AP4M1O00189 453 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 TNFSF12O43508 249 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 ATG12O94817 140 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 NDUFA3O95167 84 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 SCGB1D2O95969 90 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 IGLV1-40P01703 118 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 PF4P02776 101 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 PVALBP20472 110 aaPredicted RBP6.09□□□□□ -1.43
PNKP-229ENST00000637897 RPL12P30050 165 aaKnown RBP6.09□□□□□ -1.43
PNKP-229ENST00000637897 MYCNOSP40205 109 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 NKX2-1P43699 371 aaPredicted RBP6.09□□□□□ -1.43
PNKP-229ENST00000637897 P2RY1P47900 373 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 CATR1Q13166 79 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 MRGPRG-AS1Q2M3A8 158 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 NMSQ5H8A3 153 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 EIF5AL1Q6IS14 154 aaKnown RBP6.09□□□□□ -1.43
PNKP-229ENST00000637897 FOXRED2Q8IWF2 684 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 NPBQ8NG41 125 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 OR4D5Q8NGN0 318 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 OR51H1Q8NH63 302 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 EDARADDQ8WWZ3 215 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 LSM10Q969L4 123 aaKnown RBP6.09□□□□□ -1.43
PNKP-229ENST00000637897 ZNF580Q9UK33 172 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 GAB2Q9UQC2 676 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms