RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CLDN34H7C241 214 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 PLAUP00749 431 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 CFHR2P36980 270 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 LGALS7P47929 136 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 PDLIM4P50479 330 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 FAM90A1Q86YD7 464 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 OR4D5Q8NGN0 318 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 OR2D2Q9H210 308 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 NPIPB11E5RHQ5 1161 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 GYPAP02724 150 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 SERPINE2P07093 398 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 S100GP29377 79 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 LINC00205P59089 165 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 CXorf66Q5JRM2 361 aaPredicted RBP9.52□□□□□ -0.89
CLN6-217ENST00000636964 FGFRL1Q8N441 504 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 DRAM1Q8N682 238 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 NINJ1Q92982 152 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 CCL13Q99616 98 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 TMEM242Q9NWH2 141 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 LRBAP50851 2863 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 A0A1B0GUS0 222 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 TMEM50AO95807 157 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 PFN1P07737 140 aaKnown RBP9.52□□□□□ -0.89
CLN6-217ENST00000636964 RPL23AP62750 156 aaKnown RBP9.52□□□□□ -0.89
CLN6-217ENST00000636964 TLE1Q04724 770 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 FBLN7Q53RD9 439 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 YAE1D1Q9NRH1 226 aa9.52□□□□□ -0.89
CLN6-217ENST00000636964 A0A0G2JRQ6 117 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 TRBV7-9A0A0J9YWB2 115 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 ODAMA1E959 279 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 H0Y980 276 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 RAB11AP62491 216 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 TDRG1Q3Y452 100 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 ABHD14BQ96IU4 210 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 SDF2L1Q9HCN8 221 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 HSPB7Q9UBY9 170 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 TNFRSF18Q9Y5U5 241 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 CACNA1BQ00975 2339 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 CENPEQ02224 2701 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 USF3Q68DE3 2245 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 C17orf100A8MU93 164 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 SHISA9B4DS77 424 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 E7EQL1 145 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 GATA4P43694 442 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 CKS1BP61024 79 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 SRPXP78539 464 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 C1orf194Q5T5A4 169 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 RAB1CQ92928 201 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 PYGO2Q9BRQ0 406 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 SRD5A3Q9H8P0 318 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.51□□□□□ -0.89
CLN6-217ENST00000636964 ST8SIA3O43173 380 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 ADORA2A-AS1P86434 159 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 CLEC12BQ2HXU8 276 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 FAM216BQ8N7L0 139 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 NECAP1Q8NC96 275 aa9.51□□□□□ -0.89
CLN6-217ENST00000636964 B4DEV8 164 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 MGST3O14880 152 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 NUPR1O60356 82 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 IGKV1-39P01597 117 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 IGKV1D-39P04432 117 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 UTF1Q5T230 341 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 OR2C3Q8N628 320 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 OR5D13Q8NGL4 314 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 CCL17Q92583 94 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 HARBI1Q96MB7 349 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 C15orf65H3BRN8 121 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 SPINT2O43291 252 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 CD33P20138 364 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 VDAC1P21796 283 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 NKX2-1P43699 371 aaPredicted RBP9.5□□□□□ -0.89
CLN6-217ENST00000636964 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 BSXQ3C1V8 233 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 LEAP2Q969E1 77 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 SFRP2Q96HF1 295 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 ZNF665Q9H7R5 613 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 GNG13Q9P2W3 67 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 VAX2Q9UIW0 290 aa9.5□□□□□ -0.89
CLN6-217ENST00000636964 ANKHD1Q8IWZ3 2542 aaKnown RBP9.5□□□□□ -0.89
CLN6-217ENST00000636964 PITX3O75364 302 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 CST7O76096 145 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 MT-CO2P00403 227 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 RPL30P62888 115 aaKnown RBP9.49□□□□□ -0.89
CLN6-217ENST00000636964 ZNF726P1Q15940 193 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 ZNF585BQ52M93 769 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 NMSQ5H8A3 153 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 GPR146Q96CH1 333 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 SAP30LQ9HAJ7 183 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 GNG12Q9UBI6 72 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 RAI1Q7Z5J4 1906 aaPredicted RBP9.49□□□□□ -0.89
CLN6-217ENST00000636964 A0A1W2PPV4 95 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 SSSCA1O60232 199 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 OR5G3P0C626 314 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 DYNLT3P51808 116 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 Q6ZRM9 215 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 MRPL41Q8IXM3 137 aaKnown RBP9.49□□□□□ -0.89
CLN6-217ENST00000636964 OR10G4Q8NGN3 311 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms