RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 OR4A47Q6IF82 309 aa11.96□□□□□ -0.5
CLN6-215ENST00000636674 C1orf229Q6ZS94 237 aaPredicted RBP11.96□□□□□ -0.5
CLN6-215ENST00000636674 MRPL52Q86TS9 123 aaKnown RBP11.96□□□□□ -0.5
CLN6-215ENST00000636674 ZCCHC14Q8WYQ9 949 aaKnown RBP11.96□□□□□ -0.5
CLN6-215ENST00000636674 PLPPR2Q96GM1 343 aa11.96□□□□□ -0.5
CLN6-215ENST00000636674 EAF1Q96JC9 268 aaPredicted RBP11.96□□□□□ -0.5
CLN6-215ENST00000636674 OR10J4P0C629 311 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 LINC00310P59036 64 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 ZNF90Q03938 601 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 FOXC1Q12948 553 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 C17orf58Q2M2W7 97 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 WFIKKN1Q96NZ8 548 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 SLC25A15Q9Y619 301 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 TANC2Q9HCD6 1990 aa11.95□□□□□ -0.5
CLN6-215ENST00000636674 SAA2-SAA4A0A096LPE2 208 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 A8MXE2 369 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 TNFSF13O75888 250 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 CGAP01215 116 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 IGHV3-13P01766 116 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 SAA2P0DJI9 122 aaPredicted RBP11.94□□□□□ -0.5
CLN6-215ENST00000636674 SELLP14151 372 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 TPPP2P59282 170 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 MSMPQ1L6U9 139 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 CT45A1Q5HYN5 189 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 BHLHA15Q7RTS1 189 aaPredicted RBP11.94□□□□□ -0.5
CLN6-215ENST00000636674 CT45A3Q8NHU0 189 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 NEU1Q99519 415 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 ENY2Q9NPA8 101 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 TMEM167BQ9NRX6 74 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 TMEM106BQ9NUM4 274 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 ZNF257Q9Y2Q1 563 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 CA2P00918 260 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 LINC00869P0C866 280 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 CBLN1P23435 193 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 ATP5IP56385 69 aaPredicted RBP11.94□□□□□ -0.5
CLN6-215ENST00000636674 RANP62826 216 aaKnown RBP11.94□□□□□ -0.5
CLN6-215ENST00000636674 Q0VG73 95 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 HLA-DRB5Q30154 266 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 TGIF2LXQ8IUE1 241 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 ZNRF1Q8ND25 227 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 ZNF439Q8NDP4 499 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 FAM222BQ8WU58 562 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 MRPL18Q9H0U6 180 aaKnown RBP11.94□□□□□ -0.5
CLN6-215ENST00000636674 DKK4Q9UBT3 224 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 FRYQ5TBA9 3013 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 CEP295Q9C0D2 2601 aa11.94□□□□□ -0.5
CLN6-215ENST00000636674 PRR14LQ5THK1 2151 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 IGHV3OR15-7A0A075B7D8 119 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 KBTBD11-OT1A0A1B0GTJ5 212 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 IGFBP2P18065 325 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 RPEL1Q2QD12 228 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 TMEM30BQ3MIR4 351 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 PNKDQ8N490 385 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 SLC35E1Q96K37 410 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 OR2V2Q96R30 315 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 SNHG12Q9BXW3 62 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 PRNDQ9UKY0 176 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 SLC45A2Q9UMX9 530 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 PROCRQ9UNN8 238 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 V9GYV3 84 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 TRAV17A0A0B4J275 112 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 AHRRA9YTQ3 701 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 CRISP2P16562 243 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 RAB4AP20338 218 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 GATA4P43694 442 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 TEX43Q6ZNM6 134 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 FDCSPQ8NFU4 85 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 OR4P4Q8NGL7 312 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 STARD4Q96DR4 205 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 C20orf144Q9BQM9 153 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 GNB1LQ9BYB4 327 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
CLN6-215ENST00000636674 TPRP12270 2363 aaKnown RBP11.92□□□□□ -0.5
CLN6-215ENST00000636674 GRIFINA4D1Z8 144 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 M0R143 59 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 FOXH1O75593 365 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 HNF1AP20823 631 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 PRCDQ00LT1 54 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 C3orf36Q3SXR2 165 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 Q6ZWC4 215 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 MOGAT3Q86VF5 341 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 LRP11Q86VZ4 500 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 MMD2Q8IY49 270 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 OR1L6Q8NGR2 347 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 C19orf24Q9BVV8 132 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 SCNM1Q9BWG6 230 aa11.92□□□□□ -0.5
CLN6-215ENST00000636674 HEATR1Q9H583 2144 aaKnown RBP11.92□□□□□ -0.5
CLN6-215ENST00000636674 INTS1Q8N201 2190 aaKnown RBP11.91□□□□□ -0.5
CLN6-215ENST00000636674 SLC17A3O00476 420 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 IGHV3-7P01780 117 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 MT-ND6P03923 174 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 MRPS11P82912 194 aaKnown RBP11.91□□□□□ -0.5
CLN6-215ENST00000636674 RTL8BQ17RB0 113 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 COX19Q49B96 90 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 UTF1Q5T230 341 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 MIR17HGQ75NE6 70 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 TBX15Q96SF7 602 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 CBLN4Q9NTU7 201 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms