RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 FAUP35544 74 aaKnown RBP11.97□□□□□ -0.49
LINC00339-209ENST00000635450 AP3S2P59780 193 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 ZNF45Q02386 682 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 SURF2Q15527 256 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-209ENST00000635450 HSD17B13Q7Z5P4 300 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-209ENST00000635450 CCDC190Q86UF4 302 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 NECAP1Q8NC96 275 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 OR51S1Q8NGJ8 323 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 DLX4Q92988 240 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-209ENST00000635450 SCGB3A2Q96PL1 93 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 AKIP1Q9NQ31 210 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 PEF1Q9UBV8 284 aaKnown RBP11.97□□□□□ -0.49
LINC00339-209ENST00000635450 PRNDQ9UKY0 176 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 V9GYH0 126 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 TRBV9A0A0B4J1U6 114 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 TEX50A0A1B0GTY4 177 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 A0A1B0GW64 132 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 B3GALNT1O75752 331 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 OR2J3O76001 311 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 REG1AP05451 166 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 CRYGCP07315 174 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 AREGP15514 252 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 HIST1H1BP16401 226 aaKnown RBP11.96□□□□□ -0.49
LINC00339-209ENST00000635450 CTRB1P17538 263 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 TRIM16LQ309B1 348 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 FAM209BQ5JX69 171 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 CTRB2Q6GPI1 263 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 ZNF343Q6P1L6 599 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 TOMM5Q8N4H5 51 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 OR4A16Q8NH70 328 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 MRGPRFQ96AM1 343 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 SEC22AQ96IW7 307 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 HINT2Q9BX68 163 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 SLC2A8Q9NY64 477 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 NSG2Q9Y328 171 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 OR51B2Q9Y5P1 312 aa11.96□□□□□ -0.49
LINC00339-209ENST00000635450 TEX13DA0A0J9YY54 714 aaPredicted RBP11.95□□□□□ -0.5
LINC00339-209ENST00000635450 CGB1A6NKQ9 187 aa11.95□□□□□ -0.5
LINC00339-209ENST00000635450 CYB5BO43169 146 aa11.95□□□□□ -0.5
LINC00339-209ENST00000635450 RBMXL2O75526 392 aaKnown RBP11.95□□□□□ -0.5
LINC00339-209ENST00000635450 INSL3P51460 131 aa11.95□□□□□ -0.5
LINC00339-209ENST00000635450 AKR1C2P52895 323 aa11.95□□□□□ -0.5
LINC00339-209ENST00000635450 EXOSC2Q13868 293 aaKnown RBP11.95□□□□□ -0.5
LINC00339-209ENST00000635450 C15orf32Q32M92 178 aa11.95□□□□□ -0.5
LINC00339-209ENST00000635450 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
LINC00339-209ENST00000635450 TP53RKQ96S44 253 aa11.95□□□□□ -0.5
LINC00339-209ENST00000635450 FBXL7Q9UJT9 491 aa11.95□□□□□ -0.5
LINC00339-209ENST00000635450 IGLC7A0M8Q6 106 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 C15orf61A6NNL5 157 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 IGKV1-39P01597 117 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 IGKV1D-39P04432 117 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 ETV6P41212 452 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 MECP2P51608 486 aaKnown RBP11.94□□□□□ -0.5
LINC00339-209ENST00000635450 ZNF79Q15937 498 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 TATDN3Q17R31 274 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 HAPLN4Q86UW8 402 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 ZNF429Q86V71 674 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 GDPD1Q8N9F7 314 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 OR6Q1Q8NGQ2 317 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 OR5B3Q8NH48 314 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 RNASE11Q8TAA1 199 aaKnown RBP11.94□□□□□ -0.5
LINC00339-209ENST00000635450 LSM10Q969L4 123 aaKnown RBP11.94□□□□□ -0.5
LINC00339-209ENST00000635450 ASCL2Q99929 193 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 RTBDNQ9BSG5 229 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-209ENST00000635450 ELOVL1Q9BW60 279 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 THYN1Q9P016 225 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 GPR132Q9UNW8 380 aa11.94□□□□□ -0.5
LINC00339-209ENST00000635450 ZNF256Q9Y2P7 627 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-209ENST00000635450 RYR3Q15413 4870 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 SAP30O75446 220 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 OR13C7P0DN81 318 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 UCP1P25874 307 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 INPP1P49441 399 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 KLF9Q13886 244 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-209ENST00000635450 RPEL1Q2QD12 228 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 SP6Q3SY56 376 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 OR10W1Q8NGF6 305 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 TRIM63Q969Q1 353 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 RRNAD1Q96FB5 475 aaKnown RBP11.93□□□□□ -0.5
LINC00339-209ENST00000635450 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 NAA60Q9H7X0 242 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 TMEM14BQ9NUH8 114 aa11.93□□□□□ -0.5
LINC00339-209ENST00000635450 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.92□□□□□ -0.5
LINC00339-209ENST00000635450 LY86O95711 162 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 OR5AC1P0C628 307 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 DHODHQ02127 395 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-209ENST00000635450 ACSM6Q6P461 480 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 SGPP2Q8IWX5 399 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 DEDD2Q8WXF8 326 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 EEF1AKMT3Q96AZ1 226 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 CXorf58Q96LI9 332 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 TMEM222Q9H0R3 208 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 KCNIP3Q9Y2W7 256 aa11.92□□□□□ -0.5
LINC00339-209ENST00000635450 IGLV11-55A0A075B6I3 123 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 CRYM-AS1A6NIL9 109 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms