RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 LINC01560Q8TB33 94 aa5.88□□□□□ -1.47
BRCA1-230ENST00000634433 FAM213BQ8TBF2 198 aa5.88□□□□□ -1.47
BRCA1-230ENST00000634433 C2CD4CQ8TF44 421 aa5.88□□□□□ -1.47
BRCA1-230ENST00000634433 NPIPB3Q92617 1050 aa5.88□□□□□ -1.47
BRCA1-230ENST00000634433 PINX1Q96BK5 328 aaKnown RBP5.88□□□□□ -1.47
BRCA1-230ENST00000634433 PSMG3Q9BT73 122 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-230ENST00000634433 KAAG1Q9UBP8 84 aa5.88□□□□□ -1.47
BRCA1-230ENST00000634433 CARHSP1Q9Y2V2 147 aaKnown RBP5.88□□□□□ -1.47
BRCA1-230ENST00000634433 PCNX1Q96RV3 2341 aa5.88□□□□□ -1.47
BRCA1-230ENST00000634433 IGHV1-69-2A0A0G2JMI3 117 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 A0A1B0GW64 132 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 SCO1O75880 301 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 FSTL3O95633 263 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 HRASP01112 189 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF134P52741 427 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 RPL15P61313 204 aaKnown RBP5.87□□□□□ -1.47
BRCA1-230ENST00000634433 SERF2P84101 59 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 SLC38A11Q08AI6 406 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF841Q6ZN19 808 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF525Q8N782 197 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 OR10P1Q8NGE3 313 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF714Q96N38 554 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 LPAR2Q9HBW0 351 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 HAX1O00165 279 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 TNFRSF13BO14836 293 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-230ENST00000634433 PROP1O75360 226 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 IFNA17P01571 189 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 H2AFB1P0C5Y9 115 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 LRRC75BQ2VPJ9 315 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF672Q499Z4 452 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-230ENST00000634433 RPL39P5Q59GN2 51 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 DUX4L9Q6RFH8 374 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-230ENST00000634433 HEPN1Q6WQI6 88 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 SLC25A48Q6ZT89 311 aaKnown RBP5.87□□□□□ -1.47
BRCA1-230ENST00000634433 LYG1Q8N1E2 194 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 ZCCHC24Q8N2G6 241 aaKnown RBP5.87□□□□□ -1.47
BRCA1-230ENST00000634433 MUC15Q8N387 334 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF439Q8NDP4 499 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 PSMG3-AS1Q96PY0 264 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 NKX6-2Q9C056 277 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-230ENST00000634433 PITPNC1Q9UKF7 332 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 TIMM9Q9Y5J7 89 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 PTPN13Q12923 2485 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 NBEAQ8NFP9 2946 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 USF3Q68DE3 2245 aa5.87□□□□□ -1.47
BRCA1-230ENST00000634433 DSCAMO60469 2012 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 AGPAT2O15120 278 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 SLC31A2O15432 143 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 WIPF1O43516 503 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 GNB2P62879 340 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 BTN1A1Q13410 526 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 GUK1Q16774 197 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 RTL8BQ17RB0 113 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 STHQ8IWL8 128 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 C8orf31Q8N9H6 132 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 DDB2Q92466 427 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 FANCD2OSQ96PS1 177 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 TMEM147Q9BVK8 224 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 EIF5A2Q9GZV4 153 aaKnown RBP5.86□□□□□ -1.47
BRCA1-230ENST00000634433 ATMQ13315 3056 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 SAA2-SAA4A0A096LPE2 208 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 PPIHO43447 177 aaKnown RBP5.86□□□□□ -1.47
BRCA1-230ENST00000634433 SAA2P0DJI9 122 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-230ENST00000634433 S100A7P31151 101 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 FCGR2BP31994 310 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-230ENST00000634433 PPOXP50336 477 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 AKR1C1Q04828 323 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 TCF23Q7RTU1 214 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF429Q86V71 674 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 TGIF2LYQ8IUE0 185 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 PUSL1Q8N0Z8 303 aaKnown RBP5.86□□□□□ -1.47
BRCA1-230ENST00000634433 H1FXQ92522 213 aaKnown RBP5.86□□□□□ -1.47
BRCA1-230ENST00000634433 NEUROG1Q92886 237 aa5.86□□□□□ -1.47
BRCA1-230ENST00000634433 RBMXL1Q96E39 390 aaKnown RBP5.86□□□□□ -1.47
BRCA1-230ENST00000634433 WDR61Q9GZS3 305 aaKnown RBP5.86□□□□□ -1.47
BRCA1-230ENST00000634433 TENM4Q6N022 2769 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF98A6NK75 572 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 SOX15O60248 233 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 IGHV3-7P01780 117 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 SFTA3P0C7M3 94 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 OR9G9P0C7N8 305 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 SRSF3P84103 164 aaKnown RBP5.85□□□□□ -1.47
BRCA1-230ENST00000634433 ARL16Q0P5N6 197 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 POU2AF1Q16633 256 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 TMEM200BQ69YZ2 307 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 OR8G2PQ6IF36 304 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 FAM71F2Q6NXP2 309 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 LINC00311Q8N616 119 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 OR1L4Q8NGR5 311 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 TAF15Q92804 592 aaKnown RBP eCLIP5.85□□□□□ -1.476e-6■□□□□ 11.2
BRCA1-230ENST00000634433 LEAP2Q969E1 77 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 OR4C12Q96R67 309 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 ZNF251Q9BRH9 671 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 GGACTQ9BVM4 153 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 QTRT1Q9BXR0 403 aaKnown RBP5.85□□□□□ -1.47
BRCA1-230ENST00000634433 ENY2Q9NPA8 101 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 SIRT7Q9NRC8 400 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 CDC42EP3Q9UKI2 254 aa5.85□□□□□ -1.47
BRCA1-230ENST00000634433 FAM96BQ9Y3D0 163 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms