RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
SYNGAP1-208ENST00000629380 CENPVQ7Z7K6 275 aaPredicted RBP11.31□□□□□ -0.6
SYNGAP1-208ENST00000629380 ELOVL5Q9NYP7 299 aa11.31□□□□□ -0.6
SYNGAP1-208ENST00000629380 PEMTQ9UBM1 199 aa11.31□□□□□ -0.6
SYNGAP1-208ENST00000629380 OTX1P32242 354 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 VGLL1Q99990 258 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 NPIPB8E9PQR5 432 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 NPIPB9F8W1W9 429 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 J3QW42 95 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 NPIPB7O75200 414 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 HOXB3P14651 431 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 CTSSP25774 331 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 SSC4DQ8WTU2 575 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 GCM2O75603 506 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 C3AR1Q16581 482 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 OR5AN1Q8NGI8 311 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 ZNF721Q8TF20 911 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 PILRBQ9UKJ0 227 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 SIP14410 1827 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 PPIAL4GP0DN37 164 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 UCP3P55916 312 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 NPFFR1Q9GZQ6 430 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 LEPP41159 167 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 ZP4Q12836 540 aa11.3□□□□□ -0.6
SYNGAP1-208ENST00000629380 DPRXA6NFQ7 191 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 HAX1O00165 279 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 ZNF488Q96MN9 340 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 PEX7O00628 323 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 JMJD8Q96S16 334 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 SLC17A3O00476 420 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 CA1P00915 261 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 TRAV8-6A0A0B4J262 113 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 FXYD3Q14802 87 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 LINC00305Q7Z4B0 112 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 PAX2Q02962 417 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 NIT1Q86X76 327 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 TM4SF5O14894 197 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 DANCRP0C864 163 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 FOXJ2Q9P0K8 574 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 PEX11BO96011 259 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 PGPA6NDG6 321 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 BIVMQ86UB2 503 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 ORMDL3Q8N138 153 aa11.29□□□□□ -0.6
SYNGAP1-208ENST00000629380 RPP21Q9H633 154 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 RUNX1Q01196 453 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 DOPEY1Q5JWR5 2465 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 GTSCR1Q86UQ5 136 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 LINC01559Q495D7 138 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 TRGV3P03979 118 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 IL6RP08887 468 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 ANAPC13Q9BS18 74 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 DPH3P1Q9H4G8 78 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 CEACAM1P13688 526 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 DCAF12L2Q5VW00 463 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 C16orf47Q6ZP98 133 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 OR4X2Q8NGF9 303 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 ITLN1Q8WWA0 313 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 SLC25A15Q9Y619 301 aa11.28□□□□□ -0.6
SYNGAP1-208ENST00000629380 MRPS18BQ9Y676 258 aaKnown RBP11.27□□□□□ -0.6
SYNGAP1-208ENST00000629380 CLDN16Q9Y5I7 305 aa11.27□□□□□ -0.6
SYNGAP1-208ENST00000629380 REG1AP05451 166 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 ERGP11308 486 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 WDR82Q6UXN9 313 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 TBL2Q9Y4P3 447 aaKnown RBP11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 F8WEM9 126 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 ELF5Q9UKW6 265 aaPredicted RBP11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 A0A1W2PQF6 199 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 CCL4P13236 92 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 IRF3Q14653 427 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 TMEM106BQ9NUM4 274 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 TRGV2A0A075B6R0 118 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 M0R381 172 aa11.27□□□□□ -0.61
SYNGAP1-208ENST00000629380 GCHFRP30047 84 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 RTN4RL2Q86UN3 420 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 ITLN2Q8WWU7 325 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 PRSS23O95084 383 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 SIGLEC5O15389 551 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 PTP4A3O75365 173 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 RSPO4Q2I0M5 234 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 TRAV8-2A0A0B4J237 113 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 PGPEP1LA6NFU8 196 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 PATE3B3GLJ2 98 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 RIPPLY2Q5TAB7 128 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 TLNRD1Q9H1K6 362 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 CELA2BP08218 269 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 SELENOHQ8IZQ5 122 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 IGHV1-45A0A0A0MS14 117 aa11.26□□□□□ -0.61
SYNGAP1-208ENST00000629380 LINC01549A6NIU2 74 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms