RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 A0A1B0GTI1 187 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 C17orf100A8MU93 164 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 RNASE1P07998 156 aaKnown RBP10.79□□□□□ -0.68
SCN8A-209ENST00000627620 GPX4P36969 197 aaPredicted RBP10.79□□□□□ -0.68
SCN8A-209ENST00000627620 TEX45Q8NA69 505 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 MSGN1A6NI15 193 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 LHX2P50458 406 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 MYOFQ9NZM1 2061 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 NPFFO15130 113 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 ZP1P60852 638 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 ARPC1AQ92747 370 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 F11RQ9Y624 299 aaKnown RBP10.79□□□□□ -0.68
SCN8A-209ENST00000627620 TUBGCP6Q96RT7 1819 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 IGLV3-12A0A075B6K2 115 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 A0A0B4J293 547 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 A0A0G2JLM5 398 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 PPP1R17O96001 155 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 GPR183P32249 361 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 ERASQ7Z444 233 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 FAM90A1Q86YD7 464 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 CD69Q07108 199 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 LINC00312Q9Y6C7 94 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 C7orf69Q9H7B7 122 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 TRIOBPQ9H2D6 2365 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 PQLC2LA1A4F0 135 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 TMEM262E9PQX1 116 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 K7ERU9 68 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 NPIPB7O75200 414 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 VENTXO95231 258 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 TBX6O95947 436 aaPredicted RBP10.78□□□□□ -0.68
SCN8A-209ENST00000627620 SOD3P08294 240 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 CBLN1P23435 193 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 NUTF2P61970 127 aaKnown RBP10.78□□□□□ -0.68
SCN8A-209ENST00000627620 BIVMQ86UB2 503 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 RBBP6Q7Z6E9 1792 aaKnown RBP10.78□□□□□ -0.68
SCN8A-209ENST00000627620 DOCK3Q8IZD9 2030 aa10.78□□□□□ -0.68
SCN8A-209ENST00000627620 PAPPA-AS1Q5QFB9 102 aa10.77□□□□□ -0.68
SCN8A-209ENST00000627620 DPH3Q96FX2 82 aa10.77□□□□□ -0.68
SCN8A-209ENST00000627620 M0R381 172 aa10.77□□□□□ -0.68
SCN8A-209ENST00000627620 WDR82Q6UXN9 313 aa10.77□□□□□ -0.68
SCN8A-209ENST00000627620 SCN2AQ99250 2005 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 CDKN1AP38936 164 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 CDX1P47902 265 aaPredicted RBP10.77□□□□□ -0.69
SCN8A-209ENST00000627620 ATOH7Q8N100 152 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 PLPPR1Q8TBJ4 325 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 COPS9Q8WXC6 57 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 PIKFYVEQ9Y2I7 2098 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 IGHV3OR16-8A0A075B7F1 116 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
SCN8A-209ENST00000627620 CLEC19AQ6UXS0 136 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 WBP1Q96G27 269 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 LOC102723996A0A087X1L8 192 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 IGFBP3P17936 291 aaPredicted RBP10.77□□□□□ -0.69
SCN8A-209ENST00000627620 OR52E5Q8NH55 327 aa10.77□□□□□ -0.69
SCN8A-209ENST00000627620 ZNF646O15015 1829 aaPredicted RBP10.77□□□□□ -0.69
SCN8A-209ENST00000627620 ASIPP42127 132 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 PSMB11A5LHX3 300 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 TGFAP01135 160 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 NAT1P18440 290 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 ITLN2Q8WWU7 325 aaPredicted RBP10.76□□□□□ -0.69
SCN8A-209ENST00000627620 MRPL13Q9BYD1 178 aaKnown RBP10.76□□□□□ -0.69
SCN8A-209ENST00000627620 PEX7O00628 323 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 CCL3L1P16619 93 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 ZIC4Q8N9L1 334 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 SUMO2P61956 95 aaKnown RBP10.76□□□□□ -0.69
SCN8A-209ENST00000627620 TUBA4BQ9H853 241 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 WNT10AQ9GZT5 417 aa10.76□□□□□ -0.69
SCN8A-209ENST00000627620 MPTX1A8MV57 137 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 JOSD1Q15040 202 aaPredicted RBP10.75□□□□□ -0.69
SCN8A-209ENST00000627620 RNASE6Q93091 150 aaKnown RBP10.75□□□□□ -0.69
SCN8A-209ENST00000627620 SCO2A0A1W2PP80 73 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 SLC17A3O00476 420 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 RNASEH2CQ8TDP1 164 aaKnown RBP10.75□□□□□ -0.69
SCN8A-209ENST00000627620 DEPPQ9NTK1 212 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 TNFRSF18Q9Y5U5 241 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 GATA2P23769 480 aaPredicted RBP10.75□□□□□ -0.69
SCN8A-209ENST00000627620 FLVCR1-AS1Q8TAF5 88 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 SAA2-SAA4A0A096LPE2 208 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 H7C1H1 209 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 SAA2P0DJI9 122 aaPredicted RBP10.75□□□□□ -0.69
SCN8A-209ENST00000627620 PLP1P60201 277 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 OR4X2Q8NGF9 303 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 CACNG8Q8WXS5 425 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 PRELID3AQ96N28 172 aa10.75□□□□□ -0.69
SCN8A-209ENST00000627620 PRB3Q04118 309 aaPredicted RBP10.74□□□□□ -0.69
SCN8A-209ENST00000627620 TBR1Q16650 682 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 GCSAMLQ5JQS6 135 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 MIR17HGQ75NE6 70 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 TMEM160Q9NX00 188 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 SEMA5BQ9P283 1151 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 TRBV6-7A0A0A0MS04 114 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 MUC21A0A0G2JKD1 596 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 MUC21A0A140T8X8 626 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 SAA1P0DJI8 122 aaPredicted RBP10.74□□□□□ -0.69
SCN8A-209ENST00000627620 DDTP30046 118 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 EFNB1P98172 346 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 MUC21Q5SSG8 566 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms