RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 BRWD1-AS2P59051 145 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 DEFA5Q01523 94 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 EXOSC2Q13868 293 aaKnown RBP4.91□□□□□ -1.62
TCF4-249ENST00000625716 MRGPRG-AS1Q2M3A8 158 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 RNASE10Q5GAN6 216 aaKnown RBP4.91□□□□□ -1.62
TCF4-249ENST00000625716 C10orf55Q5SWW7 151 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 ZNF343Q6P1L6 599 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 SLC38A6Q8IZM9 456 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 RAB2BQ8WUD1 216 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 DGCR14Q96DF8 476 aaKnown RBP4.91□□□□□ -1.62
TCF4-249ENST00000625716 ZNF503Q96F45 646 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 AKIP1Q9NQ31 210 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 SLC2A9Q9NRM0 540 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 TMEM140Q9NV12 185 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 THYN1Q9P016 225 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 PEMTQ9UBM1 199 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 NOTCH1P46531 2555 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 MARCH11A6NNE9 402 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 TEX22C9J3V5 150 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 H0Y980 276 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 M0QYG6 137 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 UPK2O00526 184 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 OR2J3O76001 311 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 S1PR2O95136 353 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 KRASP01116 189 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 IL6RP08887 468 aaPredicted RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 TRAPPC2P0DI81 140 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 TRAPPC2BP0DI82 140 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 SPNP16150 400 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 TBPP20226 339 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 PSMB6P28072 239 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 RPL5P46777 297 aaKnown RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 MECP2P51608 486 aaKnown RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 TMBIM6P55061 237 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 UCP3P55916 312 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 SYNJ2BPP57105 145 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 MRPS10P82664 201 aaKnown RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 KLF5Q13887 457 aaPredicted RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 IL18Q14116 193 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 POU2AF1Q16633 256 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 C15orf32Q32M92 178 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 PHLDA2Q53GA4 152 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 THOC7Q6I9Y2 204 aaKnown RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 HSD17B13Q7Z5P4 300 aaPredicted RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 TBC1D26Q86UD7 250 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 ARRDC1Q8N5I2 433 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 OR9G4Q8NGQ1 327 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 OR1L8Q8NGR8 309 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 EEF1AKMT3Q96AZ1 226 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 DIRAS2Q96HU8 199 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 TSC22D3Q99576 134 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 B9D2Q9BPU9 175 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 BCL7BQ9BQE9 202 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 SRSF8Q9BRL6 282 aaKnown RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 HINT2Q9BX68 163 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 QTRT1Q9BXR0 403 aaKnown RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 FXYD6Q9H0Q3 95 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 FKBP11Q9NYL4 201 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 RABL2AQ9UBK7 228 aaPredicted RBP4.9□□□□□ -1.63
TCF4-249ENST00000625716 KLK11Q9UBX7 282 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 PRNDQ9UKY0 176 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 RABL2BQ9UNT1 228 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 SMAD5-AS1Q9Y6J3 95 aa4.9□□□□□ -1.63
TCF4-249ENST00000625716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.89□□□□□ -1.63
TCF4-249ENST00000625716 TRBV7-1A0A0A6YYK4 115 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 TRBV9A0A0B4J1U6 114 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 TRAV3A0A0B4J244 114 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 CCDC160A6NGH7 325 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 CTDSP2O14595 271 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 GGCTO75223 188 aaKnown RBP4.89□□□□□ -1.63
TCF4-249ENST00000625716 RBMXL2O75526 392 aaKnown RBP4.89□□□□□ -1.63
TCF4-249ENST00000625716 ATG12O94817 140 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 RAB3DO95716 219 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 TRBV12-3P01733 135 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 CD3DP04234 171 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 REG1AP05451 166 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 SERPINE2P07093 398 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 CRYGCP07315 174 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 FGF2P09038 288 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 NHLRC4P0CG21 123 aaPredicted RBP4.89□□□□□ -1.63
TCF4-249ENST00000625716 GP9P14770 177 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 AREGP15514 252 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 G6PCP35575 357 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 TAS2R19P59542 299 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 OR2B8PP59922 312 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 ZNF45Q02386 682 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 SSBP1Q04837 148 aaKnown RBP4.89□□□□□ -1.63
TCF4-249ENST00000625716 SPCS2Q15005 226 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 SCGB2B2Q4G0G5 96 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 FAM106AQ4KMX7 169 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 VAX1Q5SQQ9 334 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 CLEC19AQ6UXS0 136 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 H2BFWTQ7Z2G1 175 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 LAX1Q8IWV1 398 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 CCDC71LQ8N9Z2 235 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 TMEM229BQ8NBD8 167 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 OR52I2Q8NH67 350 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 OR4A16Q8NH70 328 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 ZFAND1Q8TCF1 268 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 ZNF486Q96H40 463 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms