RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TEPPQ6URK8 271 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 C1orf210Q8IVY1 113 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 ATOH7Q8N100 152 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 RAB1CQ92928 201 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 BTF3L4Q96K17 158 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 VAMP8Q9BV40 100 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 DMXL1Q9Y485 3027 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 IGHV3-48P01763 117 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 RPP30P78346 268 aaKnown RBP12.99□□□□□ -0.33
NPHP4-211ENST00000622020 SRSF6Q13247 344 aaKnown RBP12.99□□□□□ -0.33
NPHP4-211ENST00000622020 TRIP6Q15654 476 aaKnown RBP12.99□□□□□ -0.33
NPHP4-211ENST00000622020 CENPWQ5EE01 88 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 FAM19A2Q8N3H0 131 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 EAF1Q96JC9 268 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-211ENST00000622020 UHRF2Q96PU4 802 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 CDX2Q99626 313 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-211ENST00000622020 ADGRG4Q8IZF6 3080 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 TRAV34A0A0B4J273 112 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 TDGF1P13385 188 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 YPEL3P61236 119 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-211ENST00000622020 GMPPAQ96IJ6 420 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-211ENST00000622020 RCHY1Q96PM5 261 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 GNB4Q9HAV0 340 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 NPY1RP25929 384 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 RPEL1Q2QD12 228 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 LYG1Q8N1E2 194 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 FBXL7Q9UJT9 491 aa12.99□□□□□ -0.33
NPHP4-211ENST00000622020 LNP1A1A4G5 178 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 HELTA6NFD8 242 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 A8MXE2 369 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 PRSS46E5RG02 174 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 GNG4P50150 75 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 RHOBP62745 196 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 FAM214BQ7L5A3 538 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 SIGLECL1Q8N7X8 197 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 SLC24A4Q8NFF2 622 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 LINC00479Q96M42 142 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 SSBP3Q9BWW4 388 aaPredicted RBP12.98□□□□□ -0.33
NPHP4-211ENST00000622020 SPRY3O43610 288 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 ADH4P08319 380 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 NTF3P20783 257 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 AMTP48728 403 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 CCL11P51671 97 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 SUMO1P63165 101 aaKnown RBP12.98□□□□□ -0.33
NPHP4-211ENST00000622020 ZPBPQ9BS86 351 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 WNT10AQ9GZT5 417 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
NPHP4-211ENST00000622020 MSMPQ1L6U9 139 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 OR4A47Q6IF82 309 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 MOGAT3Q86VF5 341 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 IFI27L2Q9H2X8 130 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 MPDU1O75352 247 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 LGALS4P56470 323 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 WDR31Q8NA23 367 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 LPAR2Q9HBW0 351 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 TBL2Q9Y4P3 447 aaKnown RBP12.97□□□□□ -0.33
NPHP4-211ENST00000622020 PKDREJQ9NTG1 2253 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 POLEQ07864 2286 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 ATMQ13315 3056 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 YPEL1O60688 119 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 INO80CQ6PI98 192 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-211ENST00000622020 Q6ZT83 130 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 LHFPL4Q7Z7J7 247 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 YPEL2Q96QA6 119 aa12.97□□□□□ -0.33
NPHP4-211ENST00000622020 PTPRBP23467 1997 aa12.96□□□□□ -0.33
NPHP4-211ENST00000622020 MRPS11P82912 194 aaKnown RBP12.96□□□□□ -0.33
NPHP4-211ENST00000622020 C9orf106Q8NAJ2 232 aa12.96□□□□□ -0.33
NPHP4-211ENST00000622020 RND1Q92730 232 aa12.96□□□□□ -0.33
NPHP4-211ENST00000622020 SNRNP40Q96DI7 357 aaKnown RBP12.96□□□□□ -0.33
NPHP4-211ENST00000622020 SGK494Q96LW2 274 aa12.96□□□□□ -0.33
NPHP4-211ENST00000622020 PRO3102Q9H379 93 aa12.96□□□□□ -0.33
NPHP4-211ENST00000622020 PLEKHA3Q9HB20 300 aa12.96□□□□□ -0.33
NPHP4-211ENST00000622020 LSM4Q9Y4Z0 139 aaKnown RBP12.96□□□□□ -0.33
NPHP4-211ENST00000622020 V9GYV3 84 aa12.96□□□□□ -0.33
NPHP4-211ENST00000622020 SAA2-SAA4A0A096LPE2 208 aa12.96□□□□□ -0.34
NPHP4-211ENST00000622020 TCF21O43680 179 aa12.96□□□□□ -0.34
NPHP4-211ENST00000622020 ZNF253O75346 499 aa12.96□□□□□ -0.34
NPHP4-211ENST00000622020 SAA2P0DJI9 122 aaPredicted RBP12.96□□□□□ -0.34
NPHP4-211ENST00000622020 TMEM183BQ1AE95 376 aa12.96□□□□□ -0.34
NPHP4-211ENST00000622020 MIEN1Q9BRT3 115 aa12.96□□□□□ -0.34
NPHP4-211ENST00000622020 KALRNO60229 2985 aa12.96□□□□□ -0.34
NPHP4-211ENST00000622020 DIRC3C9JPN6 131 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 LOXL3P58215 753 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 MMDQ15546 238 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 CT45A1Q5HYN5 189 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 UBALD2Q8IYN6 164 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 TCTEX1D1Q8N7M0 179 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 CT45A3Q8NHU0 189 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 IGKV1OR2-108A0A075B7D4 117 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 TRAV5A0A0B4J249 113 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 TNFSF13O75888 250 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 SRIP30626 198 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 KIR2DL2P43627 348 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-211ENST00000622020 ZNF83P51522 516 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 GCSAMQ8N6F7 178 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 FER1L6-AS2Q96M78 137 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 OR2V2Q96R30 315 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 NABP2Q9BQ15 211 aa12.95□□□□□ -0.34
NPHP4-211ENST00000622020 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms