RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 MLXQ9UH92 298 aa16.54■□□□□ 0.24
SRRT-218ENST00000620394 A0A087WXM4 84 aa16.53■□□□□ 0.24
SRRT-218ENST00000620394 RBMY1BA6NDE4 496 aaKnown RBP16.53■□□□□ 0.24
SRRT-218ENST00000620394 RBMY1EA6NEQ0 496 aaKnown RBP16.53■□□□□ 0.24
SRRT-218ENST00000620394 PGLYRP1O75594 196 aaPredicted RBP16.53■□□□□ 0.24
SRRT-218ENST00000620394 RBMY1DP0C7P1 496 aaKnown RBP16.53■□□□□ 0.24
SRRT-218ENST00000620394 GUCA2BQ16661 112 aa16.53■□□□□ 0.24
SRRT-218ENST00000620394 DEFB125Q8N687 156 aa16.53■□□□□ 0.24
SRRT-218ENST00000620394 OR5H2Q8NGV7 314 aa16.53■□□□□ 0.24
SRRT-218ENST00000620394 SLC25A46Q96AG3 418 aa16.53■□□□□ 0.24
SRRT-218ENST00000620394 SRD5A3Q9H8P0 318 aa16.53■□□□□ 0.24
SRRT-218ENST00000620394 THYN1Q9P016 225 aa16.53■□□□□ 0.24
SRRT-218ENST00000620394 OR11H12B2RN74 326 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 CLEC3BP05452 202 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 C8orf88P0DMB2 117 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 PTBP1P26599 531 aaKnown RBP eCLIP16.52■□□□□ 0.24
SRRT-218ENST00000620394 GPR183P32249 361 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 ERVK-16P61578 105 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 WT1-ASQ06250 92 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 ZNF57Q68EA5 555 aaPredicted RBP16.52■□□□□ 0.24
SRRT-218ENST00000620394 UNQ9165/PRO28630Q6UXU0 137 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 TSPAN14Q8NG11 270 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 OR10W1Q8NGF6 305 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 VN1R17PQ8TDU5 208 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 MARC2Q969Z3 335 aa16.52■□□□□ 0.24
SRRT-218ENST00000620394 TNFAIP8O95379 198 aa16.51■□□□□ 0.23
SRRT-218ENST00000620394 PMP2P02689 132 aa16.51■□□□□ 0.23
SRRT-218ENST00000620394 PRSS3P35030 304 aa16.51■□□□□ 0.23
SRRT-218ENST00000620394 ELLP55199 621 aaPredicted RBP16.51■□□□□ 0.23
SRRT-218ENST00000620394 LSM3P62310 102 aaKnown RBP16.51■□□□□ 0.23
SRRT-218ENST00000620394 UXS1Q8NBZ7 420 aa16.51■□□□□ 0.23
SRRT-218ENST00000620394 OR1L8Q8NGR8 309 aa16.51■□□□□ 0.23
SRRT-218ENST00000620394 GPX8Q8TED1 209 aa16.51■□□□□ 0.23
SRRT-218ENST00000620394 FCAMRQ8WWV6 532 aa16.51■□□□□ 0.23
SRRT-218ENST00000620394 DGCR14Q96DF8 476 aaKnown RBP16.51■□□□□ 0.23
SRRT-218ENST00000620394 ZNF436Q9C0F3 470 aaPredicted RBP16.51■□□□□ 0.23
SRRT-218ENST00000620394 NDUFA4L2Q9NRX3 87 aa16.51■□□□□ 0.23
SRRT-218ENST00000620394 ZNF320A2RRD8 509 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 GPR31O00270 319 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 EIF4EP06730 217 aaKnown RBP16.5■□□□□ 0.23
SRRT-218ENST00000620394 SERPINE2P07093 398 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 TRAPPC2P0DI81 140 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 TRAPPC2BP0DI82 140 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 ZNF585BQ52M93 769 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 SLC16A13Q7RTY0 426 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 CMTM1Q8IZ96 169 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 CMTM3Q96MX0 182 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 ATP6V0BQ99437 205 aa16.5■□□□□ 0.23
SRRT-218ENST00000620394 FAM212BQ9NTI7 297 aaPredicted RBP16.5■□□□□ 0.23
SRRT-218ENST00000620394 TEX50A0A1B0GTY4 177 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 CYB5BO43169 146 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 TGOLN2O43493 480 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 APOA1P02647 267 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 OR13C7P0DN81 318 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 RPA2P15927 270 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 HRH1P35367 487 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 TM4SF20Q53R12 229 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 BTNL8Q6UX41 500 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 LYSMD2Q8IV50 215 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 OR6F1Q8NGZ6 308 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 TMEM190Q8WZ59 177 aa16.49■□□□□ 0.23
SRRT-218ENST00000620394 LSM10Q969L4 123 aaKnown RBP16.49■□□□□ 0.23
SRRT-218ENST00000620394 TRAV25A0A0B4J276 109 aa16.48■□□□□ 0.23
SRRT-218ENST00000620394 LPAR6P43657 344 aa16.48■□□□□ 0.23
SRRT-218ENST00000620394 PLET1Q6UQ28 207 aa16.48■□□□□ 0.23
SRRT-218ENST00000620394 SCPEP1Q9HB40 452 aa16.48■□□□□ 0.23
SRRT-218ENST00000620394 MRPL27Q9P0M9 148 aaKnown RBP16.48■□□□□ 0.23
SRRT-218ENST00000620394 UFC1Q9Y3C8 167 aa16.48■□□□□ 0.23
SRRT-218ENST00000620394 F11RQ9Y624 299 aaKnown RBP16.48■□□□□ 0.23
SRRT-218ENST00000620394 KRASP01116 189 aa16.47■□□□□ 0.23
SRRT-218ENST00000620394 G6PCP35575 357 aa16.47■□□□□ 0.23
SRRT-218ENST00000620394 MFAP2P55001 183 aa16.47■□□□□ 0.23
SRRT-218ENST00000620394 NCS1P62166 190 aa16.47■□□□□ 0.23
SRRT-218ENST00000620394 BSCL2Q96G97 398 aaPredicted RBP16.47■□□□□ 0.23
SRRT-218ENST00000620394 SELENOKQ9Y6D0 94 aa16.47■□□□□ 0.23
SRRT-218ENST00000620394 HLA-DMAP28067 261 aa16.46■□□□□ 0.23
SRRT-218ENST00000620394 ANKRD55Q3KP44 614 aa16.46■□□□□ 0.23
SRRT-218ENST00000620394 OR52B4Q8NGK2 314 aa16.46■□□□□ 0.23
SRRT-218ENST00000620394 OR5B3Q8NH48 314 aa16.46■□□□□ 0.23
SRRT-218ENST00000620394 FUNDC2Q9BWH2 189 aa16.46■□□□□ 0.23
SRRT-218ENST00000620394 TMEM14BQ9NUH8 114 aa16.46■□□□□ 0.23
SRRT-218ENST00000620394 PRNDQ9UKY0 176 aa16.46■□□□□ 0.23
SRRT-218ENST00000620394 OR51B2Q9Y5P1 312 aa16.46■□□□□ 0.23
SRRT-218ENST00000620394 C15orf61A6NNL5 157 aa16.45■□□□□ 0.22
SRRT-218ENST00000620394 F8W735 103 aaPredicted RBP16.45■□□□□ 0.22
SRRT-218ENST00000620394 SCAF4O95104 1147 aaKnown RBP16.45■□□□□ 0.22
SRRT-218ENST00000620394 LY6G6CO95867 125 aa16.45■□□□□ 0.22
SRRT-218ENST00000620394 SPSB3Q6PJ21 355 aa16.45■□□□□ 0.22
SRRT-218ENST00000620394 TSC22D3Q99576 134 aa16.45■□□□□ 0.22
SRRT-218ENST00000620394 COMMD3Q9UBI1 195 aa16.45■□□□□ 0.22
SRRT-218ENST00000620394 NSG2Q9Y328 171 aa16.45■□□□□ 0.22
SRRT-218ENST00000620394 FRAS1Q86XX4 4008 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 IGHV3-35A0A0C4DH35 117 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 OR2T8A6NH00 312 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 K7EIM0 57 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 SNAPC5O75971 98 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 RCVRNP35243 200 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 SLC25A24Q6NUK1 477 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 LPCAT3Q6P1A2 487 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 OR1L6Q8NGR2 347 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms