RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 OR10W1Q8NGF6 305 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 BTF3L4Q96K17 158 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 TRAV5A0A0B4J249 113 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 PDE6DO43924 150 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 MMP23AO75900 390 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 HPRT1P00492 218 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 TDGF1P13385 188 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 GCHFRP30047 84 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 UHRF2Q96PU4 802 aa13.24□□□□□ -0.29
DKC1-213ENST00000620277 IGHV3-21A0A0B4J1V1 117 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 PIGBOS1A0A0B4J2F0 54 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 KIR2DL2P43627 348 aaPredicted RBP13.23□□□□□ -0.29
DKC1-213ENST00000620277 SSTP61278 116 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 GMPPAQ96IJ6 420 aaPredicted RBP13.23□□□□□ -0.29
DKC1-213ENST00000620277 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 H3BTX0 84 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 WDR31Q8NA23 367 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 ST6GALNAC3Q8NDV1 305 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 SPRY4Q9C004 299 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 WNT10AQ9GZT5 417 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 PLEKHA3Q9HB20 300 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 SH3BGRL2Q9UJC5 107 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 TP53TG3Q9ULZ0 132 aa13.23□□□□□ -0.29
DKC1-213ENST00000620277 IGKV1-16P04430 117 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 CENPVQ7Z7K6 275 aaPredicted RBP13.22□□□□□ -0.29
DKC1-213ENST00000620277 RNASEH2CQ8TDP1 164 aaKnown RBP13.22□□□□□ -0.29
DKC1-213ENST00000620277 C15orf65H3BRN8 121 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 IRF2P14316 349 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 WT1P19544 449 aaPredicted RBP13.22□□□□□ -0.29
DKC1-213ENST00000620277 NPY1RP25929 384 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 NUTF2P61970 127 aaKnown RBP13.22□□□□□ -0.29
DKC1-213ENST00000620277 RELBQ01201 579 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 EIF4EBP1Q13541 118 aaPredicted RBP13.22□□□□□ -0.29
DKC1-213ENST00000620277 C21orf62-AS1Q17RA5 79 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 ITLN1Q8WWA0 313 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 C1orf159Q96HA4 380 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 NOL4LQ96MY1 436 aaPredicted RBP13.22□□□□□ -0.29
DKC1-213ENST00000620277 CCL13Q99616 98 aa13.22□□□□□ -0.29
DKC1-213ENST00000620277 MKRN2OSH3BPM6 223 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 TOX4O94842 621 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 CXorf1O96002 111 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 MMD2Q8IY49 270 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 ZBTB34Q8NCN2 500 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 OR9G1Q8NH87 305 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 MRPL37Q9BZE1 423 aaKnown RBP13.21□□□□□ -0.29
DKC1-213ENST00000620277 KCNIP2Q9NS61 270 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 DLX1P56177 255 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 CENPWQ5EE01 88 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 OR4A47Q6IF82 309 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 Q6ZT83 130 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 GCSAMQ8N6F7 178 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 C2orf88Q9BSF0 95 aa13.21□□□□□ -0.29
DKC1-213ENST00000620277 SAA2-SAA4A0A096LPE2 208 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 VENTXO95231 258 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 STAG3L2P0CL84 134 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 STAG3L3P0CL85 134 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 SAA2P0DJI9 122 aaPredicted RBP13.21□□□□□ -0.3
DKC1-213ENST00000620277 CT45A1Q5HYN5 189 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 TEPPQ6URK8 271 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 Q6ZVH6 145 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 DEFB123Q8N688 67 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 FAM216BQ8N7L0 139 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 SLC24A4Q8NFF2 622 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 CT45A3Q8NHU0 189 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 NPVFQ9HCQ7 196 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 TUBG2Q9NRH3 451 aa13.21□□□□□ -0.3
DKC1-213ENST00000620277 OTOGLQ3ZCN5 2332 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 IGHV2OR16-5A0A0B4J2B6 119 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 IGHV1-18A0A0C4DH31 117 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 M0R143 59 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 CD24P25063 80 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 LGALS4P56470 323 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 TMEM178AQ8NBL3 297 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 RCHY1Q96PM5 261 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 ZPBPQ9BS86 351 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 COL12A1Q99715 3063 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 CD59P13987 128 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 OR10J1P30954 320 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 MORN5Q5VZ52 161 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 HES4Q9HCC6 221 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 CALYQ9NYX4 217 aa13.2□□□□□ -0.3
DKC1-213ENST00000620277 AMTP48728 403 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 GNG4P50150 75 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 TNFSF10P50591 281 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 LINC00310P59036 64 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 ZCCHC14Q8WYQ9 949 aaKnown RBP13.19□□□□□ -0.3
DKC1-213ENST00000620277 IFI27L2Q9H2X8 130 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 HELTA6NFD8 242 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 REG1AP05451 166 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 VDAC2P45880 294 aaPredicted RBP13.19□□□□□ -0.3
DKC1-213ENST00000620277 CCL8P80075 99 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 MRPS11P82912 194 aaKnown RBP13.19□□□□□ -0.3
DKC1-213ENST00000620277 INO80CQ6PI98 192 aaPredicted RBP13.19□□□□□ -0.3
DKC1-213ENST00000620277 OR2T6Q8NHC8 308 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 TMEM106BQ9NUM4 274 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 C21orf140B9A014 251 aa13.19□□□□□ -0.3
DKC1-213ENST00000620277 CDX4O14627 284 aaPredicted RBP13.19□□□□□ -0.3
DKC1-213ENST00000620277 CCKARP32238 428 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms