RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 MRPL30Q8TCC3 161 aaKnown RBP10.88□□□□□ -0.67
FOXN3-219ENST00000615335 G3V4G9 280 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 ADAM20O43506 726 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 CRYAAP02489 173 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 THBDP07204 575 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 GPM6AP51674 278 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 ZNF818PQ6ZRF7 136 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 SSX8Q7RTT4 187 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 GAPTQ8N292 157 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 LINC01560Q8TB33 94 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 CHODLQ9H9P2 273 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 RBFOX2O43251 390 aaKnown RBP eCLIP10.87□□□□□ -0.677e-7■■■■■ 38.5
FOXN3-219ENST00000615335 NAPSAO96009 420 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 UCP1P25874 307 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 CXorf66Q5JRM2 361 aaPredicted RBP10.87□□□□□ -0.67
FOXN3-219ENST00000615335 SPATA46Q5T0L3 261 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 TMEM108Q6UXF1 575 aa10.87□□□□□ -0.67
FOXN3-219ENST00000615335 MRPL21Q7Z2W9 205 aaKnown RBP10.87□□□□□ -0.67
FOXN3-219ENST00000615335 FGF23Q9GZV9 251 aaPredicted RBP10.87□□□□□ -0.67
FOXN3-219ENST00000615335 HCFC1P51610 2035 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 SAA2-SAA4A0A096LPE2 208 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 SIRPB1O00241 398 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 MLNRO43193 412 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 LGALS7P47929 136 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 TFF3Q07654 80 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 ZNF154Q13106 437 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 C3orf36Q3SXR2 165 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 ODF3L1Q8IXM7 274 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 ZDHHC23Q8IYP9 409 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 WFDC12Q8WWY7 111 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 TMEM186Q96B77 213 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 NGBQ9NPG2 151 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 USP9XQ93008 2570 aaPredicted RBP10.86□□□□□ -0.67
FOXN3-219ENST00000615335 IGKV1D-13A0A0B4J2D9 117 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 KIR2DS1A0A191URI9 304 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 DPRXA6NFQ7 191 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 TRAPPC2LH3BP13 241 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 HSPB6O14558 160 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 TAX1BP3O14907 124 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 IGKV1-13P0DP09 117 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 CD40P25942 277 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 KIR2DS4P43632 304 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 KIR2DS1Q14954 304 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 CEACAM21Q3KPI0 293 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 UHRF2Q96PU4 802 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 HS3ST6Q96QI5 342 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 GPHA2Q96T91 129 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 NRN1Q9NPD7 142 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 CRIM1Q9NZV1 1036 aa10.86□□□□□ -0.67
FOXN3-219ENST00000615335 SPTAN1Q13813 2472 aaKnown RBP10.85□□□□□ -0.67
FOXN3-219ENST00000615335 C17orf112F2Z3M2 114 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 TUSC2O75896 110 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 WNT2P09544 360 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 VDAC1P21796 283 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 PRRX1P54821 245 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 C19orf35Q6ZS72 473 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 MKXQ8IYA7 352 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 LHX4Q969G2 390 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 RSG1Q9BU20 258 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 CCL28Q9NRJ3 127 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 MTCH1Q9NZJ7 389 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 PSG11Q9UQ72 335 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 TBL2Q9Y4P3 447 aaKnown RBP10.85□□□□□ -0.67
FOXN3-219ENST00000615335 PLCE1Q9P212 2302 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 ID3Q02535 119 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 NMSQ5H8A3 153 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 S100A7AQ86SG5 101 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 OR4F17Q8NGA8 305 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 ZNF48Q96MX3 618 aaPredicted RBP10.85□□□□□ -0.67
FOXN3-219ENST00000615335 OR4F4Q96R69 305 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 SLC39A9Q9NUM3 307 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 IL36RNQ9UBH0 155 aa10.85□□□□□ -0.67
FOXN3-219ENST00000615335 LOC102724200A0A096LPH7 203 aaPredicted RBP10.84□□□□□ -0.67
FOXN3-219ENST00000615335 SLC33A1O00400 549 aaPredicted RBP10.84□□□□□ -0.67
FOXN3-219ENST00000615335 BSPH1Q075Z2 132 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 STUMQ69YW2 141 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 SLC25A40Q8TBP6 338 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 NEIL1Q96FI4 390 aaPredicted RBP10.84□□□□□ -0.67
FOXN3-219ENST00000615335 ATP23Q9Y6H3 246 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 ROS1P08922 2347 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 COL12A1Q99715 3063 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 AMMECR1LQ6DCA0 310 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 OR5D13Q8NGL4 314 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 OR5P3Q8WZ94 311 aa10.84□□□□□ -0.67
FOXN3-219ENST00000615335 FAM103A1Q9BTL3 118 aaKnown RBP10.84□□□□□ -0.67
FOXN3-219ENST00000615335 MRPL18Q9H0U6 180 aaKnown RBP10.84□□□□□ -0.67
FOXN3-219ENST00000615335 ICE1Q9Y2F5 2266 aa10.83□□□□□ -0.67
FOXN3-219ENST00000615335 UBR5O95071 2799 aaPredicted RBP10.83□□□□□ -0.68
FOXN3-219ENST00000615335 DOPEY1Q5JWR5 2465 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 TRBV9A0A0B4J1U6 114 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 IGKV1-6A0A0C4DH72 117 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 H0Y980 276 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 TMPRSS2O15393 492 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 S1PR2O95136 353 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 NXPH3O95157 252 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 OR5A2Q8NGI9 324 aa10.83□□□□□ -0.68
FOXN3-219ENST00000615335 OR4F5Q8NH21 305 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms