RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 S4R3C0 116 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 FAM223BA6NKX1 122 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 SNAPC5O75971 98 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 IGKV1-5P01602 117 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 FGF2P09038 288 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 ETV6P41212 452 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 EXOSC2Q13868 293 aaKnown RBP12.84□□□□□ -0.35
CBWD3-211ENST00000615061 C9orf66Q5T8R8 295 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 FAM223AQ8IWN6 122 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 CADM3Q8N126 398 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 NECAP1Q8NC96 275 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 NDUFA4L2Q9NRX3 87 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 TMEM14BQ9NUH8 114 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 PEF1Q9UBV8 284 aaKnown RBP12.84□□□□□ -0.35
CBWD3-211ENST00000615061 FBXL7Q9UJT9 491 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 C14orf166Q9Y224 244 aaKnown RBP12.84□□□□□ -0.35
CBWD3-211ENST00000615061 DMRT1Q9Y5R6 373 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 C15orf61A6NNL5 157 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 NDUFB8O95169 186 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 IGHV3-23P01764 117 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 TRAPPC2P0DI81 140 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 TRAPPC2BP0DI82 140 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 ECI1P42126 302 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 SURF2Q15527 256 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-211ENST00000615061 SPANXN2Q5MJ10 180 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 H2BFWTQ7Z2G1 175 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 TOMM5Q8N4H5 51 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 OR1L8Q8NGR8 309 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 GPR61Q9BZJ8 451 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 SRRQ9GZT4 340 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 NDUFA13Q9P0J0 144 aa12.84□□□□□ -0.35
CBWD3-211ENST00000615061 DNAH9Q9NYC9 4486 aa12.83□□□□□ -0.36
CBWD3-211ENST00000615061 WI2-2373I1.2A0A1W2PRP0 233 aa12.83□□□□□ -0.36
CBWD3-211ENST00000615061 OR5AC1P0C628 307 aa12.83□□□□□ -0.36
CBWD3-211ENST00000615061 OR13C7P0DN81 318 aa12.83□□□□□ -0.36
CBWD3-211ENST00000615061 DEFA4P12838 97 aa12.83□□□□□ -0.36
CBWD3-211ENST00000615061 TRIM16LQ309B1 348 aa12.83□□□□□ -0.36
CBWD3-211ENST00000615061 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.36
CBWD3-211ENST00000615061 PRNDQ9UKY0 176 aa12.83□□□□□ -0.36
CBWD3-211ENST00000615061 IGLV11-55A0A075B6I3 123 aa12.82□□□□□ -0.36
CBWD3-211ENST00000615061 TEX13DA0A0J9YY54 714 aaPredicted RBP12.82□□□□□ -0.36
CBWD3-211ENST00000615061 UCP1P25874 307 aa12.82□□□□□ -0.36
CBWD3-211ENST00000615061 GDPD1Q8N9F7 314 aa12.82□□□□□ -0.36
CBWD3-211ENST00000615061 LHFPL5Q8TAF8 219 aa12.82□□□□□ -0.36
CBWD3-211ENST00000615061 MRAPQ8TCY5 172 aa12.82□□□□□ -0.36
CBWD3-211ENST00000615061 TMEM230Q96A57 120 aa12.82□□□□□ -0.36
CBWD3-211ENST00000615061 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
CBWD3-211ENST00000615061 NAA60Q9H7X0 242 aa12.82□□□□□ -0.36
CBWD3-211ENST00000615061 A0A0G2JRQ6 117 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 MFSD2BA6NFX1 497 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 PPP5D1E7EU14 171 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 K7EIL1 84 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 BMPR1BO00238 502 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 P0C879 139 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 AKR1C2P52895 323 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 OR4A16Q8NH70 328 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 GLYATL2Q8WU03 294 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 LSM10Q969L4 123 aaKnown RBP12.81□□□□□ -0.36
CBWD3-211ENST00000615061 SRSF8Q9BRL6 282 aaKnown RBP12.81□□□□□ -0.36
CBWD3-211ENST00000615061 CRYM-AS1A6NIL9 109 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 SAP30O75446 220 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 DHFRP00374 187 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 HLA-AP01891 365 aaKnown RBP12.81□□□□□ -0.36
CBWD3-211ENST00000615061 ZP3P21754 424 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 SYNJ2BPP57105 145 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 BAK1Q16611 211 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 KLK9Q2XQG4 91 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 ACSM6Q6P461 480 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 OR5B3Q8NH48 314 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 CCDC140Q96MF4 163 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 SDHCQ99643 169 aaPredicted RBP12.81□□□□□ -0.36
CBWD3-211ENST00000615061 TMEM222Q9H0R3 208 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 PRR13Q9NZ81 148 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 KLK9Q9UKQ9 250 aa12.81□□□□□ -0.36
CBWD3-211ENST00000615061 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
CBWD3-211ENST00000615061 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.8□□□□□ -0.36
CBWD3-211ENST00000615061 A0A0B4J293 547 aa12.8□□□□□ -0.36
CBWD3-211ENST00000615061 MFAP2P55001 183 aa12.8□□□□□ -0.36
CBWD3-211ENST00000615061 KLF5Q13887 457 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-211ENST00000615061 SPINK9Q5DT21 86 aa12.8□□□□□ -0.36
CBWD3-211ENST00000615061 HAPLN4Q86UW8 402 aa12.8□□□□□ -0.36
CBWD3-211ENST00000615061 FKBP11Q9NYL4 201 aa12.8□□□□□ -0.36
CBWD3-211ENST00000615061 CDS2O95674 445 aa12.79□□□□□ -0.36
CBWD3-211ENST00000615061 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
CBWD3-211ENST00000615061 MECP2P51608 486 aaKnown RBP12.79□□□□□ -0.36
CBWD3-211ENST00000615061 AP3S2P59780 193 aa12.79□□□□□ -0.36
CBWD3-211ENST00000615061 RPEL1Q2QD12 228 aa12.79□□□□□ -0.36
CBWD3-211ENST00000615061 ZNF57Q68EA5 555 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-211ENST00000615061 THOC7Q6I9Y2 204 aaKnown RBP12.79□□□□□ -0.36
CBWD3-211ENST00000615061 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
CBWD3-211ENST00000615061 AKR1C4P17516 323 aa12.79□□□□□ -0.36
CBWD3-211ENST00000615061 CLEC19AQ6UXS0 136 aa12.79□□□□□ -0.36
CBWD3-211ENST00000615061 Q6ZRM9 215 aa12.79□□□□□ -0.36
CBWD3-211ENST00000615061 ZNF429Q86V71 674 aa12.79□□□□□ -0.36
CBWD3-211ENST00000615061 PRR25Q96S07 402 aa12.79□□□□□ -0.36
CBWD3-211ENST00000615061 IGHV3-21A0A0B4J1V1 117 aa12.78□□□□□ -0.36
CBWD3-211ENST00000615061 INSL3P51460 131 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms