RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 IGHV2-26A0A0B4J1V2 119 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 TRAV24A0A0B4J272 114 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 A0A0G2JNJ9 132 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 SS18L1O75177 396 aaPredicted RBP18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 CXorf1O96002 111 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 AMTP48728 403 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 TGFBR3Q03167 851 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 SMIM15Q7Z3B0 74 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 LYG1Q8N1E2 194 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 Q8N7P7 452 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 C11orf52Q96A22 123 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 VKORC1Q9BQB6 163 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 IL36RNQ9UBH0 155 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 Q9UFV3 132 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 RBM7Q9Y580 266 aaKnown RBP18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 PCNX1Q96RV3 2341 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 LOC105371242A0A075B767 164 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 TSPOP30536 169 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 CEACAM16Q2WEN9 425 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 DRAM1Q8N682 238 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 RNF114Q9Y508 228 aa18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 INTS1Q8N201 2190 aaKnown RBP18.19■□□□□ 0.5
POLR2J3-220ENST00000613744 TRAV30A0A087WSZ9 112 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 IGHV1-69-2A0A0G2JMI3 117 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 PGPEP1LA6NFU8 196 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 PATE4P0C8F1 98 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 CEACAM8P31997 349 aaPredicted RBP18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 GUSBP1Q15486 140 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 IL1F10Q8WWZ1 152 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 NCOR1P1Q9H4R4 102 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 CLN8Q9UBY8 286 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 DPRXA6NFQ7 191 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 ZNF324O75467 553 aaPredicted RBP18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 S1PR2O95136 353 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 OR10J4P0C629 311 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 STAG3L2P0CL84 134 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 STAG3L3P0CL85 134 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 HNF1AP20823 631 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 IER3P46695 156 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 FBLN7Q53RD9 439 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 ALKBH2Q6NS38 261 aa18.18■□□□□ 0.5
POLR2J3-220ENST00000613744 F2Z2F3 143 aa18.17■□□□□ 0.5
POLR2J3-220ENST00000613744 RAB29O14966 203 aa18.17■□□□□ 0.5
POLR2J3-220ENST00000613744 TNFSF4P23510 183 aa18.17■□□□□ 0.5
POLR2J3-220ENST00000613744 RHOBP62745 196 aa18.17■□□□□ 0.5
POLR2J3-220ENST00000613744 MMD2Q8IY49 270 aa18.17■□□□□ 0.5
POLR2J3-220ENST00000613744 FAM103A1Q9BTL3 118 aaKnown RBP18.17■□□□□ 0.5
POLR2J3-220ENST00000613744 GP6Q9HCN6 339 aa18.17■□□□□ 0.5
POLR2J3-220ENST00000613744 A0A1W2PS18 150 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 ODAMA1E959 279 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 OPRK1P41145 380 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 FOXG1P55316 489 aaPredicted RBP18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 RND1Q92730 232 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 TRGV10A0A0A0MS01 117 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 NXPH2O95156 264 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 HTD2P86397 168 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 FAM58AQ8N1B3 248 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 FGFBP3Q8TAT2 258 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 TUBG2Q9NRH3 451 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 PPIAL4AQ9Y536 164 aa18.16■□□□□ 0.5
POLR2J3-220ENST00000613744 SCO2A0A1W2PP80 73 aa18.15■□□□□ 0.5
POLR2J3-220ENST00000613744 SH2D1BO14796 132 aa18.15■□□□□ 0.5
POLR2J3-220ENST00000613744 ZNF718Q3SXZ3 478 aa18.15■□□□□ 0.5
POLR2J3-220ENST00000613744 MRPL21Q7Z2W9 205 aaKnown RBP18.15■□□□□ 0.5
POLR2J3-220ENST00000613744 OR4C5Q8NGB2 326 aa18.15■□□□□ 0.5
POLR2J3-220ENST00000613744 LINC00470Q9BZP3 86 aa18.15■□□□□ 0.5
POLR2J3-220ENST00000613744 MRPL27Q9P0M9 148 aaKnown RBP18.15■□□□□ 0.5
POLR2J3-220ENST00000613744 ZG16O60844 167 aa18.14■□□□□ 0.5
POLR2J3-220ENST00000613744 C3orf79P0CE67 100 aa18.14■□□□□ 0.5
POLR2J3-220ENST00000613744 ZNF645Q8N7E2 425 aa18.14■□□□□ 0.5
POLR2J3-220ENST00000613744 PKIBQ9C010 78 aa18.14■□□□□ 0.5
POLR2J3-220ENST00000613744 KCNIP1Q9NZI2 227 aa18.14■□□□□ 0.5
POLR2J3-220ENST00000613744 OR5B21A6NL26 309 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 SIRPB1O00241 398 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 SYNGR1O43759 233 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 CLDN14O95500 239 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 THBS3P49746 956 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 CX3CL1P78423 397 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 ADORA2A-AS1P86434 159 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 CATR1Q13166 79 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 OR4P4Q8NGL7 312 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 ARL2-SNX15V9GYD0 113 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 V9GYV3 84 aa18.14■□□□□ 0.49
POLR2J3-220ENST00000613744 DIDO1Q9BTC0 2240 aaKnown RBP18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 A0A096LPE4 126 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 TRAV38-1A0A0B4J264 116 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 A0A1W2PPZ6 126 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 A0A1W2PR80 420 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 K7EN84 100 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 MT-CO2P00403 227 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 PSG7Q13046 419 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 STUMQ69YW2 141 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 NIT1Q86X76 327 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 WDR31Q8NA23 367 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 UHRF2Q96PU4 802 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 PROCRQ9UNN8 238 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 IGLC7A0M8Q6 106 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 CDIPTO14735 213 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 CGAP01215 116 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 HLA-DQA1P01909 254 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms