RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 CGB1A6NKQ9 187 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 H0Y980 276 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 CYB5BO43169 146 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 ATG12O94817 140 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 FGF2P09038 288 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 HIST1H1BP16401 226 aaKnown RBP13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 CTRB1P17538 263 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 PTBP1P26599 531 aaKnown RBP eCLIP13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 MECP2P51608 486 aaKnown RBP13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 SP6Q3SY56 376 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 ZNF429Q86V71 674 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 CADM3Q8N126 398 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 Q8N402 240 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 OR10W1Q8NGF6 305 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 MRGPRFQ96AM1 343 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 SRSF8Q9BRL6 282 aaKnown RBP13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 NDUFA13Q9P0J0 144 aa13.9□□□□□ -0.18
IGHV3-41-201ENST00000613121 NDUFB8O95169 186 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 IGKV1-39P01597 117 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 IGKV1D-39P04432 117 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 OR13C7P0DN81 318 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 SURF2Q15527 256 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 THOC7Q6I9Y2 204 aaKnown RBP13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 SLC25A24Q6NUK1 477 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 HSD17B13Q7Z5P4 300 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 TOMM5Q8N4H5 51 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 SEC22AQ96IW7 307 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 TMEM56Q96MV1 263 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 SCGB3A2Q96PL1 93 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 TP53RKQ96S44 253 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 THYN1Q9P016 225 aa13.89□□□□□ -0.19
IGHV3-41-201ENST00000613121 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 WI2-2373I1.2A0A1W2PRP0 233 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 IGLC7A0M8Q6 106 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 LY86O95711 162 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 TRBV12-3P01733 135 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 IGHV3-23P01764 117 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 FAUP35544 74 aaKnown RBP13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 AKR1C2P52895 323 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 SYNJ2BPP57105 145 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 AP3S2P59780 193 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 KLF5Q13887 457 aaPredicted RBP13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 SPANXN2Q5MJ10 180 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 ACSM6Q6P461 480 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 RNASE11Q8TAA1 199 aaKnown RBP13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 LSM10Q969L4 123 aaKnown RBP13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 FANCD2OSQ96PS1 177 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 RTBDNQ9BSG5 229 aaPredicted RBP13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 NDUFA4L2Q9NRX3 87 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 GPR132Q9UNW8 380 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 S4R3C0 116 aa13.88□□□□□ -0.19
IGHV3-41-201ENST00000613121 K7EIL1 84 aa13.87□□□□□ -0.19
IGHV3-41-201ENST00000613121 B3GALNT1O75752 331 aa13.87□□□□□ -0.19
IGHV3-41-201ENST00000613121 FAM209BQ5JX69 171 aa13.87□□□□□ -0.19
IGHV3-41-201ENST00000613121 CCDC190Q86UF4 302 aa13.87□□□□□ -0.19
IGHV3-41-201ENST00000613121 OR5B3Q8NH48 314 aa13.87□□□□□ -0.19
IGHV3-41-201ENST00000613121 EEF1AKMT3Q96AZ1 226 aa13.87□□□□□ -0.19
IGHV3-41-201ENST00000613121 RRNAD1Q96FB5 475 aaKnown RBP13.87□□□□□ -0.19
IGHV3-41-201ENST00000613121 V9GYH0 126 aa13.87□□□□□ -0.19
IGHV3-41-201ENST00000613121 C15orf61A6NNL5 157 aa13.86□□□□□ -0.19
IGHV3-41-201ENST00000613121 CLEC19AQ6UXS0 136 aa13.86□□□□□ -0.19
IGHV3-41-201ENST00000613121 GDPD1Q8N9F7 314 aa13.86□□□□□ -0.19
IGHV3-41-201ENST00000613121 CXorf58Q96LI9 332 aa13.86□□□□□ -0.19
IGHV3-41-201ENST00000613121 PRR25Q96S07 402 aa13.86□□□□□ -0.19
IGHV3-41-201ENST00000613121 C5orf66Q9H5L9 145 aa13.86□□□□□ -0.19
IGHV3-41-201ENST00000613121 NAA60Q9H7X0 242 aa13.86□□□□□ -0.19
IGHV3-41-201ENST00000613121 IGLV11-55A0A075B6I3 123 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 DBX1A6NMT0 343 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 OR5AC1P0C628 307 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 INPP1P49441 399 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 HSPE1P61604 102 aaKnown RBP13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 DHODHQ02127 395 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 WT1-ASQ06250 92 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 IZUMO4Q1ZYL8 232 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 ZNF57Q68EA5 555 aaPredicted RBP13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 SGPP2Q8IWX5 399 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 OR9G4Q8NGQ1 327 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 OR6Q1Q8NGQ2 317 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 TMEM14BQ9NUH8 114 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 SLC2A8Q9NY64 477 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 ZNF256Q9Y2P7 627 aaPredicted RBP13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 KCNIP3Q9Y2W7 256 aa13.85□□□□□ -0.19
IGHV3-41-201ENST00000613121 PPP5D1E7EU14 171 aa13.84□□□□□ -0.19
IGHV3-41-201ENST00000613121 GGCTO75223 188 aaKnown RBP13.84□□□□□ -0.19
IGHV3-41-201ENST00000613121 CLEC3BP05452 202 aa13.84□□□□□ -0.19
IGHV3-41-201ENST00000613121 UCP1P25874 307 aa13.84□□□□□ -0.19
IGHV3-41-201ENST00000613121 KLF9Q13886 244 aaPredicted RBP13.84□□□□□ -0.19
IGHV3-41-201ENST00000613121 ZNF79Q15937 498 aa13.84□□□□□ -0.19
IGHV3-41-201ENST00000613121 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
IGHV3-41-201ENST00000613121 PEMTQ9UBM1 199 aa13.84□□□□□ -0.19
IGHV3-41-201ENST00000613121 NOTCH3Q9UM47 2321 aa13.83□□□□□ -0.2
IGHV3-41-201ENST00000613121 TRBV7-1A0A0A6YYK4 115 aa13.83□□□□□ -0.2
IGHV3-41-201ENST00000613121 BMPR1BO00238 502 aa13.83□□□□□ -0.2
IGHV3-41-201ENST00000613121 OR2C1O95371 312 aa13.83□□□□□ -0.2
IGHV3-41-201ENST00000613121 IFNA17P01571 189 aa13.83□□□□□ -0.2
IGHV3-41-201ENST00000613121 IGKV1-5P01602 117 aa13.83□□□□□ -0.2
IGHV3-41-201ENST00000613121 AKR1C4P17516 323 aa13.83□□□□□ -0.2
IGHV3-41-201ENST00000613121 ARL3P36405 182 aa13.83□□□□□ -0.2
IGHV3-41-201ENST00000613121 ERHP84090 104 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms