RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LOC102723971A0A1B0GUV8 181 aa9.1□□□□□ -0.95
FAM3A-221ENST00000612856 PROB1E7EW31 1015 aa9.1□□□□□ -0.95
FAM3A-221ENST00000612856 CBLN1P23435 193 aa9.1□□□□□ -0.95
FAM3A-221ENST00000612856 TCL1AP56279 114 aa9.1□□□□□ -0.95
FAM3A-221ENST00000612856 TAS2R30P59541 319 aa9.1□□□□□ -0.95
FAM3A-221ENST00000612856 IL24Q13007 206 aa9.1□□□□□ -0.95
FAM3A-221ENST00000612856 SLC25A53Q5H9E4 307 aa9.1□□□□□ -0.95
FAM3A-221ENST00000612856 ARL2-SNX15V9GYD0 113 aa9.1□□□□□ -0.95
FAM3A-221ENST00000612856 ODAMA1E959 279 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 DPRXA6NFQ7 191 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 PGPEP1LA6NFU8 196 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 BRS3P32247 399 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 IER3P46695 156 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 SPSB3Q6PJ21 355 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 GBGT1Q8N5D6 347 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 MTCH1Q9NZJ7 389 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 NAT8BQ9UHF3 227 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 F6UZH7 168 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 HCP5Q6MZN7 132 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 FAM168AQ92567 244 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 MSI2Q96DH6 328 aaKnown RBP9.09□□□□□ -0.95
FAM3A-221ENST00000612856 PARLQ9H300 379 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 LIN7CQ9NUP9 197 aaKnown RBP9.09□□□□□ -0.95
FAM3A-221ENST00000612856 IGHV3OR16-13A0A075B7E8 117 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 IGHV3-74A0A0B4J1X5 117 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 OPRK1P41145 380 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 RPL19P84098 196 aaKnown RBP9.09□□□□□ -0.95
FAM3A-221ENST00000612856 MEF2BQ02080 365 aaPredicted RBP9.09□□□□□ -0.95
FAM3A-221ENST00000612856 TMEM187Q14656 261 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 CLCF1Q9UBD9 225 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 F8P00451 2351 aa9.09□□□□□ -0.95
FAM3A-221ENST00000612856 HELZ2Q9BYK8 2649 aaKnown RBP9.08□□□□□ -0.96
FAM3A-221ENST00000612856 hCG_38984A0A1B0GV85 526 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 C17orf100A8MU93 164 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 B9A039 149 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 GZMHP20718 246 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 PRRX1P54821 245 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 RIPPLY3P57055 190 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 ZNF714Q96N38 554 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 C7orf69Q9H7B7 122 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 MDH2P40926 338 aaKnown RBP9.08□□□□□ -0.96
FAM3A-221ENST00000612856 OR4A47Q6IF82 309 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 H1FOOQ8IZA3 346 aaPredicted RBP9.08□□□□□ -0.96
FAM3A-221ENST00000612856 ST6GALNAC6Q969X2 333 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 SS18L1O75177 396 aaPredicted RBP9.08□□□□□ -0.96
FAM3A-221ENST00000612856 PITX3O75364 302 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
FAM3A-221ENST00000612856 SRPXP78539 464 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 ERHP84090 104 aaKnown RBP9.08□□□□□ -0.96
FAM3A-221ENST00000612856 FFAR4Q5NUL3 377 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 PRR27Q6MZM9 219 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 PRDM14Q9GZV8 571 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 ZNF581Q9P0T4 197 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 TUBD1Q9UJT1 453 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 ZFP30Q9Y2G7 519 aa9.08□□□□□ -0.96
FAM3A-221ENST00000612856 TRBV24-1A0A075B6N3 115 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 IGLV3-32A0A0A0MS00 114 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 IGKV1-9A0A0C4DH69 117 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 TRDCB7Z8K6 153 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 OR7C2O60412 319 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 ZNF253O75346 499 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 CA7P43166 264 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 FGF12P61328 243 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 SP5Q6BEB4 398 aaPredicted RBP9.07□□□□□ -0.96
FAM3A-221ENST00000612856 LINC00470Q9BZP3 86 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 YAE1D1Q9NRH1 226 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 COL4A2P08572 1712 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 ARHGAP32A7KAX9 2087 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 J3KRW8 73 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 MGST3O14880 152 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 REG1AP05451 166 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 PSG2P11465 335 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 OTX1P32242 354 aaPredicted RBP9.07□□□□□ -0.96
FAM3A-221ENST00000612856 Q56UQ5 140 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 GATAD1Q8WUU5 269 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 RCC1LQ96I51 464 aaKnown RBP9.07□□□□□ -0.96
FAM3A-221ENST00000612856 LYZL4Q96KX0 146 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 HSD17B10Q99714 261 aaKnown RBP9.07□□□□□ -0.96
FAM3A-221ENST00000612856 REPIN1Q9BWE0 567 aaKnown RBP9.07□□□□□ -0.96
FAM3A-221ENST00000612856 LYRM2Q9NU23 88 aaPredicted RBP9.07□□□□□ -0.96
FAM3A-221ENST00000612856 ELOVL5Q9NYP7 299 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 WASHC3Q9Y3C0 194 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 FAM215AQ9Y5M1 114 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 CDS2O95674 445 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 VMA21Q3ZAQ7 101 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 KLHDC1Q8N7A1 406 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
FAM3A-221ENST00000612856 LOC105371242A0A075B767 164 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 OOEPA6NGQ2 149 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 SNURFLB1AK76 121 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 SLC25A17O43808 307 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 IGHMP01871 453 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 HTN1P15515 57 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 RPL23P62829 140 aaKnown RBP9.06□□□□□ -0.96
FAM3A-221ENST00000612856 FDX2Q6P4F2 183 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 OR51G1Q8NGK1 321 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 TMEM45BQ96B21 275 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 LAMTOR2Q9Y2Q5 125 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms