RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 C15orf32Q32M92 178 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 OR51S1Q8NGJ8 323 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 OR1L8Q8NGR8 309 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 FANCD2OSQ96PS1 177 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 THAP7Q9BT49 309 aaPredicted RBP13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 PEF1Q9UBV8 284 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 PRNDQ9UKY0 176 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 OR51B2Q9Y5P1 312 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 TEX50A0A1B0GTY4 177 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 KLK9Q2XQG4 91 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 H2BFWTQ7Z2G1 175 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 Q8N402 240 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 C5orf66Q9H5L9 145 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 TMEM14BQ9NUH8 114 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 FBXL7Q9UJT9 491 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 KLK9Q9UKQ9 250 aa13.88□□□□□ -0.19
SEMA3B-211ENST00000612509 IGLV11-55A0A075B6I3 123 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 DBX1A6NMT0 343 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 TRAPPC2P0DI81 140 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 TRAPPC2BP0DI82 140 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 DEFA4P12838 97 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 HIST1H1BP16401 226 aaKnown RBP13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 UCP1P25874 307 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 INSL3P51460 131 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 KLF9Q13886 244 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 HSD17B13Q7Z5P4 300 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 OR10W1Q8NGF6 305 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 OR5B3Q8NH48 314 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 LSM10Q969L4 123 aaKnown RBP13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 RTBDNQ9BSG5 229 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 NDUFA4L2Q9NRX3 87 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 MCUBQ9NWR8 336 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 NDUFA13Q9P0J0 144 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 ZMAT5Q9UDW3 170 aaKnown RBP13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 SCP2D1Q9UJQ7 156 aa13.87□□□□□ -0.19
SEMA3B-211ENST00000612509 WI2-2373I1.2A0A1W2PRP0 233 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 K7EIL1 84 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 SAP30O75446 220 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 B3GALNT1O75752 331 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 NDUFB8O95169 186 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 ETV6P41212 452 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 AKR1C2P52895 323 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 WT1-ASQ06250 92 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 TRIM16LQ309B1 348 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 SPANXN2Q5MJ10 180 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 ACSM6Q6P461 480 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 ZNF429Q86V71 674 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 GDPD1Q8N9F7 314 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 OR6Q1Q8NGQ2 317 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 OR4A16Q8NH70 328 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 HINT2Q9BX68 163 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 NAA60Q9H7X0 242 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 FKBP11Q9NYL4 201 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 GPR132Q9UNW8 380 aa13.86□□□□□ -0.19
SEMA3B-211ENST00000612509 BMPR1BO00238 502 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 IGKV1-5P01602 117 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 OR5AC1P0C628 307 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 P0C879 139 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 OR13C7P0DN81 318 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 FAUP35544 74 aaKnown RBP13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 AP3S2P59780 193 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 RPEL1Q2QD12 228 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 SP6Q3SY56 376 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 FAM209BQ5JX69 171 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 TOMM5Q8N4H5 51 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 CCDC140Q96MF4 163 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 SRRQ9GZT4 340 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 DMRT1Q9Y5R6 373 aa13.85□□□□□ -0.19
SEMA3B-211ENST00000612509 TEX13DA0A0J9YY54 714 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 CRYM-AS1A6NIL9 109 aa13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 ATG12O94817 140 aa13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 IGHV3-23P01764 117 aa13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 SYNJ2BPP57105 145 aa13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 KLF5Q13887 457 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 EEF1AKMT3Q96AZ1 226 aa13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 TMEM56Q96MV1 263 aa13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 TMEM222Q9H0R3 208 aa13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 S4R3C0 116 aa13.84□□□□□ -0.19
SEMA3B-211ENST00000612509 MFSD2BA6NFX1 497 aa13.83□□□□□ -0.2
SEMA3B-211ENST00000612509 MECP2P51608 486 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-211ENST00000612509 IZUMO4Q1ZYL8 232 aa13.83□□□□□ -0.2
SEMA3B-211ENST00000612509 SCGB3A2Q96PL1 93 aa13.83□□□□□ -0.2
SEMA3B-211ENST00000612509 ELOVL1Q9BW60 279 aa13.83□□□□□ -0.2
SEMA3B-211ENST00000612509 F11RQ9Y624 299 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-211ENST00000612509 TGP01266 2768 aa13.83□□□□□ -0.2
SEMA3B-211ENST00000612509 PPP5D1E7EU14 171 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 CYB5BO43169 146 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 PRCDQ00LT1 54 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 OR9G4Q8NGQ1 327 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 RNASE11Q8TAA1 199 aaKnown RBP13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 LHFPL5Q8TAF8 219 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 DEDD2Q8WXF8 326 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 TMEM230Q96A57 120 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 CXorf58Q96LI9 332 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 OR4C12Q96R67 309 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 PRR25Q96S07 402 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 THYN1Q9P016 225 aa13.82□□□□□ -0.2
SEMA3B-211ENST00000612509 ZNF256Q9Y2P7 627 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms