RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ENY2Q9NPA8 101 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 TIMM8BQ9Y5J9 83 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-216ENST00000610401 REG1BP48304 166 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 AMTP48728 403 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 C1orf194Q5T5A4 169 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 TMEM144Q7Z5S9 345 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 OR5AU1Q8NGC0 362 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 RCHY1Q96PM5 261 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 VAMP8Q9BV40 100 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 CXXC4Q9H2H0 198 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 PLEKHA3Q9HB20 300 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 NKX2-8O15522 239 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 TDGF1P3P51864 188 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 LCN2P80188 198 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 EIF4EBP1Q13541 118 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-216ENST00000610401 ACSF3Q4G176 576 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-216ENST00000610401 CENPWQ5EE01 88 aa16.84■□□□□ 0.29
SSBP3-216ENST00000610401 PARD6GQ9BYG4 376 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-216ENST00000610401 ASH1LQ9NR48 2969 aaKnown RBP16.84■□□□□ 0.29
SSBP3-216ENST00000610401 IGKV1D-17A0A075B6S4 117 aa16.83■□□□□ 0.29
SSBP3-216ENST00000610401 STAG3L2P0CL84 134 aa16.83■□□□□ 0.29
SSBP3-216ENST00000610401 STAG3L3P0CL85 134 aa16.83■□□□□ 0.29
SSBP3-216ENST00000610401 TPPP2P59282 170 aa16.83■□□□□ 0.29
SSBP3-216ENST00000610401 ZBTB34Q8NCN2 500 aa16.83■□□□□ 0.29
SSBP3-216ENST00000610401 DIRC2Q96SL1 478 aa16.83■□□□□ 0.29
SSBP3-216ENST00000610401 TYMSP04818 313 aa16.83■□□□□ 0.28
SSBP3-216ENST00000610401 C1orf159Q96HA4 380 aa16.83■□□□□ 0.28
SSBP3-216ENST00000610401 TRAV5A0A0B4J249 113 aa16.83■□□□□ 0.28
SSBP3-216ENST00000610401 NPY1RP25929 384 aa16.83■□□□□ 0.28
SSBP3-216ENST00000610401 PRB3Q04118 309 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-216ENST00000610401 MSMPQ1L6U9 139 aa16.83■□□□□ 0.28
SSBP3-216ENST00000610401 CACNA1BQ00975 2339 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 MAJINQ3KP22 176 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 TEPPQ6URK8 271 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 SIGLECL1Q8N7X8 197 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 OR10W1Q8NGF6 305 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 GNB4Q9HAV0 340 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 ZZEF1O43149 2961 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 GNG4P50150 75 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 RELBQ01201 579 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 ERASQ7Z444 233 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 ZCCHC24Q8N2G6 241 aaKnown RBP16.82■□□□□ 0.28
SSBP3-216ENST00000610401 C9orf106Q8NAJ2 232 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 LRBAP50851 2863 aa16.82■□□□□ 0.28
SSBP3-216ENST00000610401 FAM214BQ7L5A3 538 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 BEND2Q8NDZ0 799 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 NPVFQ9HCQ7 196 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 DCAF16Q9NXF7 216 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 FBXL7Q9UJT9 491 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 HELTA6NFD8 242 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 C15orf65H3BRN8 121 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 ACP1P24666 158 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 SLC24A4Q8NFF2 622 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 OR2V2Q96R30 315 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 ZNF253O75346 499 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 IGKV1-16P04430 117 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 PAX1P15863 534 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 FOXL1Q12952 345 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 MMDQ15546 238 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 OR4A47Q6IF82 309 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 LCN12Q6JVE5 192 aa16.81■□□□□ 0.28
SSBP3-216ENST00000610401 ZFHX2Q9C0A1 2572 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-216ENST00000610401 A8MXE2 369 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 M0R1B8 84 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 CD24P25063 80 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 OPRK1P41145 380 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 ZNF718Q3SXZ3 478 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 OR9G1Q8NH87 305 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 EAF1Q96JC9 268 aaPredicted RBP16.8■□□□□ 0.28
SSBP3-216ENST00000610401 TMEM208Q9BTX3 173 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 TBL2Q9Y4P3 447 aaKnown RBP16.8■□□□□ 0.28
SSBP3-216ENST00000610401 H3BTX0 84 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 SRIP30626 198 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 GPR6P46095 362 aaPredicted RBP16.8■□□□□ 0.28
SSBP3-216ENST00000610401 RPEL1Q2QD12 228 aa16.8■□□□□ 0.28
SSBP3-216ENST00000610401 MMP23AO75900 390 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 VWC2Q2TAL6 325 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 GMPPAQ96IJ6 420 aaPredicted RBP16.79■□□□□ 0.28
SSBP3-216ENST00000610401 IL36BQ9NZH7 164 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 TP73-AS1Q9UF72 201 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 DYSFO75923 2080 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 SAA2-SAA4A0A096LPE2 208 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 SAA2P0DJI9 122 aaPredicted RBP16.79■□□□□ 0.28
SSBP3-216ENST00000610401 VDAC2P45880 294 aaPredicted RBP16.79■□□□□ 0.28
SSBP3-216ENST00000610401 RHOBP62745 196 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 TPTE2P1Q5T6R2 138 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 MDS2Q8NDY4 140 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 FAM168AQ92567 244 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 HES4Q9HCC6 221 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 IGHV3-21A0A0B4J1V1 117 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 TMPRSS2O15393 492 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 DNLZQ5SXM8 178 aa16.79■□□□□ 0.28
SSBP3-216ENST00000610401 DIRC3C9JPN6 131 aa16.78■□□□□ 0.28
SSBP3-216ENST00000610401 TOX4O94842 621 aa16.78■□□□□ 0.28
SSBP3-216ENST00000610401 RPP30P78346 268 aaKnown RBP16.78■□□□□ 0.28
SSBP3-216ENST00000610401 MORN5Q5VZ52 161 aa16.78■□□□□ 0.28
SSBP3-216ENST00000610401 DMRTA1Q5VZB9 504 aa16.78■□□□□ 0.28
SSBP3-216ENST00000610401 CAMPP49913 170 aa16.78■□□□□ 0.28
SSBP3-216ENST00000610401 CT45A1Q5HYN5 189 aa16.78■□□□□ 0.28
SSBP3-216ENST00000610401 CT45A3Q8NHU0 189 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms