RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 OR2W1Q9Y3N9 320 aa11.09□□□□□ -0.63
SSBP4-214ENST00000607020 RBM7Q9Y580 266 aaKnown RBP11.09□□□□□ -0.63
SSBP4-214ENST00000607020 ZNF320A2RRD8 509 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 DPPA5A6NC42 116 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 PSMB6P28072 239 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
SSBP4-214ENST00000607020 RCVRNP35243 200 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 CDK10Q15131 360 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 BTNL8Q6UX41 500 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 RBPMS2Q6ZRY4 209 aaKnown RBP11.08□□□□□ -0.64
SSBP4-214ENST00000607020 DGCR14Q96DF8 476 aaKnown RBP11.08□□□□□ -0.64
SSBP4-214ENST00000607020 DIRAS2Q96HU8 199 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 FANCD2OSQ96PS1 177 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 ABHD1Q96SE0 405 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
SSBP4-214ENST00000607020 MRPL27Q9P0M9 148 aaKnown RBP11.08□□□□□ -0.64
SSBP4-214ENST00000607020 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
SSBP4-214ENST00000607020 IGKV1D-13A0A0B4J2D9 117 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 TEX22C9J3V5 150 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 J3QRK9 145 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 CRYZL1O95825 349 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 CRYGCP07315 174 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 SAA1P0DJI8 122 aaPredicted RBP11.07□□□□□ -0.64
SSBP4-214ENST00000607020 IGKV1-13P0DP09 117 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 FCGR2CP31995 323 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 ELLP55199 621 aaPredicted RBP11.07□□□□□ -0.64
SSBP4-214ENST00000607020 TAS2R46P59540 309 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 CLEC19AQ6UXS0 136 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 MFFQ9GZY8 342 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 C5orf66Q9H5L9 145 aa11.07□□□□□ -0.64
SSBP4-214ENST00000607020 LINC00473A8K010 186 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 SLC22A5O76082 557 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 PPYP01298 95 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 MED14OSP0DP75 135 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 HLA-DMAP28067 261 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 TNFSF8P32971 234 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 HRH1P35367 487 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 RFX2P48378 723 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 MRPS10P82664 201 aaKnown RBP11.06□□□□□ -0.64
SSBP4-214ENST00000607020 RNASE12Q5GAN4 147 aaKnown RBP11.06□□□□□ -0.64
SSBP4-214ENST00000607020 C10orf55Q5SWW7 151 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 LYSMD2Q8IV50 215 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 ZNF645Q8N7E2 425 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 OR5H2Q8NGV7 314 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 OR52I2Q8NH67 350 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 GIMAP1Q8WWP7 306 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 EEF1AKMT3Q96AZ1 226 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 SLC2A9Q9NRM0 540 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 EHFQ9NZC4 300 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 RABL2AQ9UBK7 228 aaPredicted RBP11.06□□□□□ -0.64
SSBP4-214ENST00000607020 KLK11Q9UBX7 282 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 RABL2BQ9UNT1 228 aa11.06□□□□□ -0.64
SSBP4-214ENST00000607020 HMX3A6NHT5 357 aa11.05□□□□□ -0.64
SSBP4-214ENST00000607020 GABARAPH6UMI1 98 aa11.05□□□□□ -0.64
SSBP4-214ENST00000607020 TSPAN4O14817 238 aa11.05□□□□□ -0.64
SSBP4-214ENST00000607020 PMP2P02689 132 aa11.05□□□□□ -0.64
SSBP4-214ENST00000607020 IL6RP08887 468 aaPredicted RBP11.05□□□□□ -0.64
SSBP4-214ENST00000607020 IL18Q14116 193 aa11.05□□□□□ -0.64
SSBP4-214ENST00000607020 FCAMRQ8WWV6 532 aa11.05□□□□□ -0.64
SSBP4-214ENST00000607020 FYTTD1Q96QD9 318 aaKnown RBP11.05□□□□□ -0.64
SSBP4-214ENST00000607020 MAP6D1Q9H9H5 199 aa11.05□□□□□ -0.64
SSBP4-214ENST00000607020 MTFP1Q9UDX5 166 aa11.05□□□□□ -0.64
SSBP4-214ENST00000607020 TRBV7-1A0A0A6YYK4 115 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 CTDSPLO15194 276 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 DHFRP00374 187 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 IGLV2-14P01704 120 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 IGHV3-23P01764 117 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 IFNA4P05014 189 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 CLEC3BP05452 202 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 MYOD1P15172 320 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
SSBP4-214ENST00000607020 ZNF585BQ52M93 769 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 DHRS11Q6UWP2 260 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 SMIM4Q8WVI0 70 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 GALNT14Q96FL9 552 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 SOSTQ9BQB4 213 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 RBMX2Q9Y388 322 aaKnown RBP11.04□□□□□ -0.64
SSBP4-214ENST00000607020 UFC1Q9Y3C8 167 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 DNAH6Q9C0G6 4158 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 ABCA13Q86UQ4 5058 aa11.04□□□□□ -0.64
SSBP4-214ENST00000607020 A0A1B0GVY2 172 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 FABP12A6NFH5 140 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 CTRB1P17538 263 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 S100A5P33763 92 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 MAS1LP35410 378 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 FXYD4P59646 89 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 HERV-K104P61576 105 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 SSBP1Q04837 148 aaKnown RBP11.03□□□□□ -0.64
SSBP4-214ENST00000607020 MSMO1Q15800 293 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 ODF3L2Q3SX64 289 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 CTRB2Q6GPI1 263 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 C19orf35Q6ZS72 473 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 TMEM17Q86X19 198 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 C11orf45Q8TAV5 145 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 C2CD4CQ8TF44 421 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 SECTM1Q8WVN6 248 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 CXorf58Q96LI9 332 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms