RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 DISC1C4P0D8 188 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 NDUFB8O95169 186 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 SERPINE2P07093 398 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 CTSDP07339 412 aaPredicted RBP9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 TRAPPC2P0DI81 140 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 TRAPPC2BP0DI82 140 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 ZP3P21754 424 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 WT1-ASQ06250 92 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 EXOSC2Q13868 293 aaKnown RBP9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 ZNF79Q15937 498 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 ZNF429Q86V71 674 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 OR51S1Q8NGJ8 323 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 OR1L8Q8NGR8 309 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 TRIM63Q969Q1 353 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 C5orf66Q9H5L9 145 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 TMEM14BQ9NUH8 114 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 SLC2A8Q9NY64 477 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 FBXL7Q9UJT9 491 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 GPR132Q9UNW8 380 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 OR51B2Q9Y5P1 312 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 COL7A1Q02388 2944 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 C15orf61A6NNL5 157 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 BMPR1BO00238 502 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 SAP30O75446 220 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 SNAPC5O75971 98 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 DHFRP00374 187 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 IGKV1-5P01602 117 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 P0C879 139 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 ECI1P42126 302 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 SURF2Q15527 256 aaPredicted RBP9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 SP6Q3SY56 376 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 IL34Q6ZMJ4 242 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 PRRT1Q99946 306 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 COPZ2Q9P299 210 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 ZMAT5Q9UDW3 170 aaKnown RBP9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 PRNDQ9UKY0 176 aa9.79□□□□□ -0.84
SHROOM1-207ENST00000606676 OR13C7P0DN81 318 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 DEFA4P12838 97 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 HIST1H1BP16401 226 aaKnown RBP9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 UCP1P25874 307 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 S100A5P33763 92 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 ETV6P41212 452 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 SYNJ2BPP57105 145 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 KLF9Q13886 244 aaPredicted RBP9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 IZUMO4Q1ZYL8 232 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 PYDC2Q56P42 97 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 THOC7Q6I9Y2 204 aaKnown RBP9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 H2BFWTQ7Z2G1 175 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 HSD17B13Q7Z5P4 300 aaPredicted RBP9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 Q8N402 240 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 GDPD1Q8N9F7 314 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 CCDC71LQ8N9Z2 235 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 OR5B3Q8NH48 314 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 TSC22D3Q99576 134 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 FKBP11Q9NYL4 201 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 S4R3C0 116 aa9.78□□□□□ -0.84
SHROOM1-207ENST00000606676 A0A0B4J293 547 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 MFSD2BA6NFX1 497 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 PPP5D1E7EU14 171 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 IGHV3-23P01764 117 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 MFAP2P55001 183 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 OR9G4Q8NGQ1 327 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 OR6Q1Q8NGQ2 317 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 OR4A16Q8NH70 328 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 GLYATL2Q8WU03 294 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 LSM10Q969L4 123 aaKnown RBP9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 PRR25Q96S07 402 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 HINT2Q9BX68 163 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 TMEM222Q9H0R3 208 aa9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 C14orf166Q9Y224 244 aaKnown RBP9.77□□□□□ -0.85
SHROOM1-207ENST00000606676 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 CRYM-AS1A6NIL9 109 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 B3GALNT1O75752 331 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 CDS2O95674 445 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 HLA-AP01891 365 aaKnown RBP9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 OR5AC1P0C628 307 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 HSPE1P61604 102 aaKnown RBP9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 RPEL1Q2QD12 228 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 DEFB121Q5J5C9 76 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 FAM209BQ5JX69 171 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 LHFPL5Q8TAF8 219 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 TMEM230Q96A57 120 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 OR4C12Q96R67 309 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 ELOVL1Q9BW60 279 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 NAA60Q9H7X0 242 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 MCUBQ9NWR8 336 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 NDUFA13Q9P0J0 144 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 SCP2D1Q9UJQ7 156 aa9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 ZNF256Q9Y2P7 627 aaPredicted RBP9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 LSM4Q9Y4Z0 139 aaKnown RBP9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 F11RQ9Y624 299 aaKnown RBP9.76□□□□□ -0.85
SHROOM1-207ENST00000606676 TEX13DA0A0J9YY54 714 aaPredicted RBP9.75□□□□□ -0.85
SHROOM1-207ENST00000606676 IGLV1-51P01701 117 aa9.75□□□□□ -0.85
SHROOM1-207ENST00000606676 CSN3P07498 182 aa9.75□□□□□ -0.85
SHROOM1-207ENST00000606676 SPNP16150 400 aa9.75□□□□□ -0.85
SHROOM1-207ENST00000606676 PRCDQ00LT1 54 aa9.75□□□□□ -0.85
SHROOM1-207ENST00000606676 TRIM16LQ309B1 348 aa9.75□□□□□ -0.85
SHROOM1-207ENST00000606676 CLEC19AQ6UXS0 136 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms