RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 FOXC2Q99958 501 aa10.53□□□□□ -0.72
SHANK2-218ENST00000601538 FNDC4Q9H6D8 234 aaPredicted RBP10.53□□□□□ -0.72
SHANK2-218ENST00000601538 GFRA1P56159 465 aa10.52□□□□□ -0.72
SHANK2-218ENST00000601538 SSBP2P81877 361 aaPredicted RBP10.52□□□□□ -0.72
SHANK2-218ENST00000601538 C5orf66Q9H5L9 145 aa10.52□□□□□ -0.72
SHANK2-218ENST00000601538 TRBV5-7A0A0A0MS05 114 aa10.52□□□□□ -0.72
SHANK2-218ENST00000601538 PPIAL4DF5H284 164 aa10.52□□□□□ -0.72
SHANK2-218ENST00000601538 HMGA1P17096 107 aaKnown RBP10.52□□□□□ -0.72
SHANK2-218ENST00000601538 FXYD3Q14802 87 aa10.52□□□□□ -0.72
SHANK2-218ENST00000601538 TNFRSF18Q9Y5U5 241 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 GZMBP10144 247 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 MORN3Q6PF18 240 aaPredicted RBP10.52□□□□□ -0.73
SHANK2-218ENST00000601538 GNRHR2Q96P88 292 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 SMPXQ9UHP9 88 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 IZUMO1RA6ND01 250 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 C1QL1O75973 258 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 DPM2O94777 84 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 APOHP02749 345 aaPredicted RBP10.52□□□□□ -0.73
SHANK2-218ENST00000601538 PPBPP02775 128 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 RSPO3Q9BXY4 272 aaPredicted RBP10.52□□□□□ -0.73
SHANK2-218ENST00000601538 C6orf106Q9H6K1 298 aaPredicted RBP10.52□□□□□ -0.73
SHANK2-218ENST00000601538 H0Y8X5 98 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 SSTR5P35346 364 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 OR52M1Q8NGK5 317 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 BTCP35070 178 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 ID4P47928 161 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 NXPH1P58417 271 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 WIPI1Q5MNZ9 446 aaPredicted RBP10.52□□□□□ -0.73
SHANK2-218ENST00000601538 Q6ZNB5 142 aa10.52□□□□□ -0.73
SHANK2-218ENST00000601538 SLC25A38Q96DW6 304 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 NXT2Q9NPJ8 142 aaKnown RBP10.51□□□□□ -0.73
SHANK2-218ENST00000601538 CRYBB3P26998 211 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 MIC13Q5XKP0 118 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 WDR54Q9H977 334 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 IGHV2-5P01817 119 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 DEFB109BQ30KR1 87 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 LAIR2Q6ISS4 152 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 A0A1W2PPC1 479 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 PIMREGQ9BSJ6 248 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 TNFSF14O43557 240 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 CRPP02741 224 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 PAX1P15863 534 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 GFERP55789 205 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 ZNF488Q96MN9 340 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 RTN4RQ9BZR6 473 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 A0A1W2PR80 420 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 FAM106AQ4KMX7 169 aa10.51□□□□□ -0.73
SHANK2-218ENST00000601538 A0A1W2PP11 408 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 LHX8Q68G74 356 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 FBLN5Q9UBX5 448 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 IGKV3-7A0A075B6H7 116 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 CEACAM4O75871 244 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 COX5BP10606 129 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
SHANK2-218ENST00000601538 MGST3O14880 152 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 IGHV3-13P01766 116 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 IGHV3-7P01780 117 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 TSPAN7P41732 249 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 LDLRAD1Q5T700 205 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 DLX4Q92988 240 aaPredicted RBP10.5□□□□□ -0.73
SHANK2-218ENST00000601538 RPP21Q9H633 154 aaKnown RBP10.5□□□□□ -0.73
SHANK2-218ENST00000601538 PEX7O00628 323 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 FUT5Q11128 374 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 PRKNO60260 465 aaPredicted RBP10.5□□□□□ -0.73
SHANK2-218ENST00000601538 OR9G9P0C7N8 305 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 KIAA1644Q3SXP7 199 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 SHISA5Q8N114 240 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 GPBAR1Q8TDU6 330 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 MRPS18BQ9Y676 258 aaKnown RBP10.5□□□□□ -0.73
SHANK2-218ENST00000601538 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.5□□□□□ -0.73
SHANK2-218ENST00000601538 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 GCHFRP30047 84 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 COL10A1Q03692 680 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 TMEM86BQ8N661 226 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 SDF2L1Q9HCN8 221 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 NRN1Q9NPD7 142 aa10.5□□□□□ -0.73
SHANK2-218ENST00000601538 HSPE1P61604 102 aaKnown RBP10.49□□□□□ -0.73
SHANK2-218ENST00000601538 FGFRL1Q8N441 504 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 PATE1Q8WXA2 126 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 NHP2Q9NX24 153 aaKnown RBP10.49□□□□□ -0.73
SHANK2-218ENST00000601538 FOXD3Q9UJU5 478 aaPredicted RBP10.49□□□□□ -0.73
SHANK2-218ENST00000601538 IGHV4-39P01824 125 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 PTGDSP41222 190 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 MED13LQ71F56 2210 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 EDIL3O43854 480 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 ORMDL2Q53FV1 153 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 SELENOHQ8IZQ5 122 aaKnown RBP10.49□□□□□ -0.73
SHANK2-218ENST00000601538 LY96Q9Y6Y9 160 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 TRAV8-1A0A0A6YYK1 113 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 GDF15Q99988 308 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 NRXN2Q9P2S2 1712 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 CADM4Q8NFZ8 388 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 ZNF479Q96JC4 524 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 SPTY2D1-AS1A0A0U1RR47 76 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 CST9LQ9H4G1 147 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 GOLT1AQ6ZVE7 132 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 LRRC61Q9BV99 259 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
SHANK2-218ENST00000601538 PLXNA4Q9HCM2 1894 aa10.48□□□□□ -0.73
SHANK2-218ENST00000601538 PTCRAQ6ISU1 281 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms