RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 OR1L8Q8NGR8 309 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 TSC22D3Q99576 134 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 COMMD5Q9GZQ3 224 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 ALX4Q9H161 411 aaPredicted RBP10.66□□□□□ -0.7
VRK3-219ENST00000600137 GNB4Q9HAV0 340 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 PRNDQ9UKY0 176 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 OR51B2Q9Y5P1 312 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 DMRT1Q9Y5R6 373 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 C9orf170A2RU37 121 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 NPIPB5A8MRT5 1133 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 SNAPC5O75971 98 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 PRH1P02810 166 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 TRAPPC2P0DI81 140 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 TRAPPC2BP0DI82 140 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 ANXA7P20073 488 aaKnown RBP10.65□□□□□ -0.7
VRK3-219ENST00000600137 PSMB6P28072 239 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 MECP2P51608 486 aaKnown RBP10.65□□□□□ -0.7
VRK3-219ENST00000600137 UBE2MP61081 183 aaKnown RBP10.65□□□□□ -0.7
VRK3-219ENST00000600137 HSPE1P61604 102 aaKnown RBP10.65□□□□□ -0.7
VRK3-219ENST00000600137 RUNX1Q01196 453 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 C2orf68Q2NKX9 166 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 NMSQ5H8A3 153 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 C8orf86Q6ZUL3 223 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 ZNF695Q8IW36 515 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 SLC35G3Q8N808 338 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 OR5B3Q8NH48 314 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 LSM10Q969L4 123 aaKnown RBP10.65□□□□□ -0.7
VRK3-219ENST00000600137 PHB2Q99623 299 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 SRSF8Q9BRL6 282 aaKnown RBP10.65□□□□□ -0.7
VRK3-219ENST00000600137 QTRT1Q9BXR0 403 aaKnown RBP10.65□□□□□ -0.7
VRK3-219ENST00000600137 SLA2Q9H6Q3 261 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 ZNF257Q9Y2Q1 563 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 NOTCH3Q9UM47 2321 aa10.65□□□□□ -0.7
VRK3-219ENST00000600137 A0A0B4J2A0 478 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 OR4E1P0C645 316 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 AKR1C2P52895 323 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 DEFA5Q01523 94 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 TMEM65Q6PI78 240 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 FAM219AQ8IW50 185 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 KLHL30-AS1Q8NEE0 82 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 DUSP18Q8NEJ0 188 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 OR4A16Q8NH70 328 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 RAX2Q96IS3 184 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 P2RX4Q99571 388 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 C20orf85Q9H1P6 137 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 FKBP11Q9NYL4 201 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 SHPKQ9UHJ6 478 aa10.64□□□□□ -0.71
VRK3-219ENST00000600137 ST8SIA3O43173 380 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 ATG12O94817 140 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 TRGV3P03979 118 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 REG1AP05451 166 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 MFAP2P55001 183 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 PRCDQ00LT1 54 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 DHRS2Q13268 280 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 KHDC1LQ5JSQ8 128 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 THOC7Q6I9Y2 204 aaKnown RBP10.63□□□□□ -0.71
VRK3-219ENST00000600137 TREML4Q6UXN2 200 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 LGI3Q8N145 548 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 WFDC9Q8NEX5 89 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 C4orf3Q8WVX3 66 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 RRNAD1Q96FB5 475 aaKnown RBP10.63□□□□□ -0.71
VRK3-219ENST00000600137 COA4Q9NYJ1 87 aa10.63□□□□□ -0.71
VRK3-219ENST00000600137 NOTCH1P46531 2555 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 IGLV11-55A0A075B6I3 123 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 TRAV6A0A075B6T7 132 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 FAM240BA0A1B0GVZ2 78 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 INS-IGF2F8WCM5 200 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 PITX3O75364 302 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 OR13C7P0DN81 318 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 ANXA3P12429 323 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 VAMP1P23763 118 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 TPPP2P59282 170 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 FHL3Q13643 280 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 DEFB136Q30KP8 78 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 PDLIM3Q53GG5 364 aaPredicted RBP10.62□□□□□ -0.71
VRK3-219ENST00000600137 NRARPQ7Z6K4 114 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 LYG2Q86SG7 212 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 OR4F17Q8NGA8 305 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 DUX3Q96PT4 197 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 OR5B12Q96R08 314 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 OR4F4Q96R69 305 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.62□□□□□ -0.71
VRK3-219ENST00000600137 ZNF355PQ9NSJ1 428 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 NUDT15Q9NV35 164 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 CACNG5Q9UF02 275 aa10.62□□□□□ -0.71
VRK3-219ENST00000600137 DUXBA0A1W2PPF3 345 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 NDUFB8O95169 186 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 DUS4LO95620 317 aaKnown RBP10.61□□□□□ -0.71
VRK3-219ENST00000600137 IGHV3-11P01762 117 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 MYCNOSP40205 109 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 SRPXP78539 464 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 RHOGP84095 191 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 MZT2BQ6NZ67 158 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 ZNF343Q6P1L6 599 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 OR2C3Q8N628 320 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 LINC00482Q8N8I6 264 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 OR52B4Q8NGK2 314 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 OR52E5Q8NH55 327 aa10.61□□□□□ -0.71
VRK3-219ENST00000600137 HINT2Q9BX68 163 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms