RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RHOGP84095 191 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 SCGB2B2Q4G0G5 96 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 FAM209BQ5JX69 171 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 LINC00299Q6ZSB3 139 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 ZNF429Q86V71 674 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 CCDC71LQ8N9Z2 235 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 OR1L8Q8NGR8 309 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 GLYATL2Q8WU03 294 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 DCUN1D4Q92564 292 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 DLX4Q92988 240 aaPredicted RBP13.55□□□□□ -0.24
USHBP1-209ENST00000598570 TSC22D3Q99576 134 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 SDHCQ99643 169 aaPredicted RBP13.55□□□□□ -0.24
USHBP1-209ENST00000598570 ZNF355PQ9NSJ1 428 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.54□□□□□ -0.24
USHBP1-209ENST00000598570 CRYM-AS1A6NIL9 109 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 DBX1A6NMT0 343 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 C15orf61A6NNL5 157 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 INS-IGF2F8WCM5 200 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 SERPINE2P07093 398 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 HIST1H1BP16401 226 aaKnown RBP13.54□□□□□ -0.24
USHBP1-209ENST00000598570 WT1-ASQ06250 92 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 DPF1Q92782 380 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 GALNT14Q96FL9 552 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 TMEM222Q9H0R3 208 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 PEF1Q9UBV8 284 aaKnown RBP13.54□□□□□ -0.24
USHBP1-209ENST00000598570 SCP2D1Q9UJQ7 156 aa13.54□□□□□ -0.24
USHBP1-209ENST00000598570 PRH1P02810 166 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 ZP3P21754 424 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 PPP5CP53041 499 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 AP3S2P59780 193 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 ATP5G2Q06055 141 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 PYDC2Q56P42 97 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 SPANXN2Q5MJ10 180 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 C9orf66Q5T8R8 295 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 ACSM6Q6P461 480 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 TMEM56Q96MV1 263 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 COPZ2Q9P299 210 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 ZMAT5Q9UDW3 170 aaKnown RBP13.53□□□□□ -0.24
USHBP1-209ENST00000598570 TMEM56-RWDD3S4R434 201 aa13.53□□□□□ -0.24
USHBP1-209ENST00000598570 SORL1Q92673 2214 aa13.52□□□□□ -0.24
USHBP1-209ENST00000598570 A0A0B4J293 547 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 TEX13DA0A0J9YY54 714 aaPredicted RBP13.52□□□□□ -0.25
USHBP1-209ENST00000598570 OVOL1O14753 267 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 SNAPC5O75971 98 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 DHFRP00374 187 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 HOXD3P31249 432 aaPredicted RBP13.52□□□□□ -0.25
USHBP1-209ENST00000598570 SLURP1P55000 103 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 IL34Q6ZMJ4 242 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 OR10W1Q8NGF6 305 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 TMEM230Q96A57 120 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 SCGB3A2Q96PL1 93 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 NAA60Q9H7X0 242 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 AURKAIP1Q9NWT8 199 aaPredicted RBP13.52□□□□□ -0.25
USHBP1-209ENST00000598570 OR51B2Q9Y5P1 312 aa13.52□□□□□ -0.25
USHBP1-209ENST00000598570 ATG12O94817 140 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 NDUFB8O95169 186 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 TRBV12-3P01733 135 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 HSPE1P61604 102 aaKnown RBP13.51□□□□□ -0.25
USHBP1-209ENST00000598570 DHODHQ02127 395 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 C15orf32Q32M92 178 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 SP6Q3SY56 376 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 PVRIGQ6DKI7 326 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 C19orf35Q6ZS72 473 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 H2BFWTQ7Z2G1 175 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 LSM10Q969L4 123 aaKnown RBP13.51□□□□□ -0.25
USHBP1-209ENST00000598570 ATP6V0BQ99437 205 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 FBXL7Q9UJT9 491 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 C14orf166Q9Y224 244 aaKnown RBP13.51□□□□□ -0.25
USHBP1-209ENST00000598570 NSG2Q9Y328 171 aa13.51□□□□□ -0.25
USHBP1-209ENST00000598570 SEC14L6B5MCN3 397 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 BMPR1BO00238 502 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 FAUP35544 74 aaKnown RBP13.5□□□□□ -0.25
USHBP1-209ENST00000598570 MECP2P51608 486 aaKnown RBP13.5□□□□□ -0.25
USHBP1-209ENST00000598570 MFAP2P55001 183 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
USHBP1-209ENST00000598570 BAK1Q16611 211 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 FAM219AQ8IW50 185 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 TOMM5Q8N4H5 51 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 ZNF114Q8NC26 417 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 LHFPL5Q8TAF8 219 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 IL22RA2Q969J5 263 aa13.5□□□□□ -0.25
USHBP1-209ENST00000598570 SLC25A21Q9BQT8 299 aaPredicted RBP13.5□□□□□ -0.25
USHBP1-209ENST00000598570 OR2J3O76001 311 aa13.49□□□□□ -0.25
USHBP1-209ENST00000598570 OR5AC1P0C628 307 aa13.49□□□□□ -0.25
USHBP1-209ENST00000598570 PRCDQ00LT1 54 aa13.49□□□□□ -0.25
USHBP1-209ENST00000598570 SELENOHQ8IZQ5 122 aaKnown RBP13.49□□□□□ -0.25
USHBP1-209ENST00000598570 VN1R17PQ8TDU5 208 aa13.49□□□□□ -0.25
USHBP1-209ENST00000598570 CCDC140Q96MF4 163 aa13.49□□□□□ -0.25
USHBP1-209ENST00000598570 F11RQ9Y624 299 aaKnown RBP13.49□□□□□ -0.25
USHBP1-209ENST00000598570 TRBV7-1A0A0A6YYK4 115 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 A0A0G2JRQ6 117 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 K7EIL1 84 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 OR13C7P0DN81 318 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 RAB25P57735 213 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 DEFA5Q01523 94 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 EXOSC2Q13868 293 aaKnown RBP13.48□□□□□ -0.25
USHBP1-209ENST00000598570 TMEM187Q14656 261 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms